| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1690 |
|---|
| Symbol | |
|---|
| ID | 8357833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2036462 |
|---|
| End bp | 2036851 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963870 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003121387 |
|---|
| Protein GI | 256420734 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAC AGGTAGCTGA AAAAACAAAA AGAAATGCGA GAGAGTGCGC CGCGAGGTTA
TCAGCCATTC ACGACGCCCT TTATGCCATT GGTGGCAAAT GGAAGCTGAA AATCATCATT
GTGCTCCGCG AAGACGGCAA TAAAAGATTT AACGAACTGC AGCGATCGGT ATCAGGTATT
TCTGCAAGGG TATTGTCCAA TGAACTGCGC GAACTGGAAC TGAACGGCTT TGTCAGAAGA
AAGGTATATG AAGGACGTCC TGTCGTGGTG GAATACGAAC TGACAGAATA CAGCGATACA
CTTGGCGCAG TGTTACATTC ACTGAATGAC TGGGGTACTA TGCACAGGGA AAAGATCCGC
AAGGAAATAT CCTCCTCTTC ACAGGGCTGA
|
|---|
| Protein sequence | METQVAEKTK RNARECAARL SAIHDALYAI GGKWKLKIII VLREDGNKRF NELQRSVSGI
SARVLSNELR ELELNGFVRR KVYEGRPVVV EYELTEYSDT LGAVLHSLND WGTMHREKIR
KEISSSSQG
|
|---|
| |