Gene Cpin_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1681 
Symbol 
ID8357824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2028061 
End bp2028531 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID644963861 
ProductRDD domain containing protein 
Protein accessionYP_003121378 
Protein GI256420725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC GATTTGGAGA CAATATCCCT GAAAAAGGAC TGATAGAAGA TCTGCACGCT 
ATTCAGTATA CAAGGAAGGC TGAAAAGACC CAGCGCTTCG TGAATTATGT AGTGGATTAT
ATCATTGCGA TCTCTCTTGG CGTGATGTTT TCACTGGGAG TAGTGCTGAT TATAACAGCG
TTAAGTGATG CTAAATTTGA CGAATCCGGT GGTCTTGTGT TCTTGTTTTA CTTTACGATG
GGAACGGGTT TTGTGGCCTA TTATACAGGC TTTGAGTATG GTAACGGGGG CCGTACTATC
GGTAAAATGA TCACGGCTAC CTATGCGGTG CGTACAGATG GAAGTCCGCT GACTTTACAG
GATGCATTCC TGCGTTCATT ATCCCGTCTT GTACCTTTTA TGCGATTTTC AGGATTTGCG
GATACACCCT GGCATGACCA ATGGACCAAT ACCATGGTGA TCAAGAGATA A
 
Protein sequence
MQNRFGDNIP EKGLIEDLHA IQYTRKAEKT QRFVNYVVDY IIAISLGVMF SLGVVLIITA 
LSDAKFDESG GLVFLFYFTM GTGFVAYYTG FEYGNGGRTI GKMITATYAV RTDGSPLTLQ
DAFLRSLSRL VPFMRFSGFA DTPWHDQWTN TMVIKR