Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1658 |
Symbol | |
ID | 8357800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1997872 |
End bp | 1998438 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963838 |
Product | translation elongation factor P |
Protein accession | YP_003121355 |
Protein GI | 256420702 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCA CTGCAGATAT CAGAACAGGA TTGATTATAA AGCTGGATAA CAGCTTATAT TCTGTTGTAG AGTTTGGTCA GAACAAAACA GCCCGTGCCG CTGCTAAAGT ATGGGCTAAA CTGAAAGGTG TTGACAATAG CAGATCTATT GAACACACCT GGAACTCAGG CGACACTATA TACCCTGTGC GTGTTGAGAA GAAGGCATTC CAGTTTTTAT ACCAGGATGA CAGTGGTTAC AACTTCATGG ATAATGAGAC TTTCGAGCAG ATCGCTTTAC CAGAAACGAT GATCGATGCC CCTCAGTTCC TGAAAGAAGG CCAGGAAGTA GGTGTTTCTA TCAACACCGA GACTGAACAA CCAATGAGCG TAGAACTGCC TGACAAGATC GTTGTAAAAG TTACTTACTC CGAGCCAGGT CTGAAGGGTG ATACAGCTAC CCGTACGCTG AAACCAGCTA CCGTTGAAAC CGGTGCTACC GTAAACGTTC CACTGTTCGT AAACGAAGGT GAACTTATCA GAGTAAACAC CAAGAATGGT GAATACATCG AGAGAGTAAA AGAATAG
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Protein sequence | MATTADIRTG LIIKLDNSLY SVVEFGQNKT ARAAAKVWAK LKGVDNSRSI EHTWNSGDTI YPVRVEKKAF QFLYQDDSGY NFMDNETFEQ IALPETMIDA PQFLKEGQEV GVSINTETEQ PMSVELPDKI VVKVTYSEPG LKGDTATRTL KPATVETGAT VNVPLFVNEG ELIRVNTKNG EYIERVKE
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