Gene Cpin_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1658 
Symbol 
ID8357800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1997872 
End bp1998438 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID644963838 
Producttranslation elongation factor P 
Protein accessionYP_003121355 
Protein GI256420702 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA CTGCAGATAT CAGAACAGGA TTGATTATAA AGCTGGATAA CAGCTTATAT 
TCTGTTGTAG AGTTTGGTCA GAACAAAACA GCCCGTGCCG CTGCTAAAGT ATGGGCTAAA
CTGAAAGGTG TTGACAATAG CAGATCTATT GAACACACCT GGAACTCAGG CGACACTATA
TACCCTGTGC GTGTTGAGAA GAAGGCATTC CAGTTTTTAT ACCAGGATGA CAGTGGTTAC
AACTTCATGG ATAATGAGAC TTTCGAGCAG ATCGCTTTAC CAGAAACGAT GATCGATGCC
CCTCAGTTCC TGAAAGAAGG CCAGGAAGTA GGTGTTTCTA TCAACACCGA GACTGAACAA
CCAATGAGCG TAGAACTGCC TGACAAGATC GTTGTAAAAG TTACTTACTC CGAGCCAGGT
CTGAAGGGTG ATACAGCTAC CCGTACGCTG AAACCAGCTA CCGTTGAAAC CGGTGCTACC
GTAAACGTTC CACTGTTCGT AAACGAAGGT GAACTTATCA GAGTAAACAC CAAGAATGGT
GAATACATCG AGAGAGTAAA AGAATAG
 
Protein sequence
MATTADIRTG LIIKLDNSLY SVVEFGQNKT ARAAAKVWAK LKGVDNSRSI EHTWNSGDTI 
YPVRVEKKAF QFLYQDDSGY NFMDNETFEQ IALPETMIDA PQFLKEGQEV GVSINTETEQ
PMSVELPDKI VVKVTYSEPG LKGDTATRTL KPATVETGAT VNVPLFVNEG ELIRVNTKNG
EYIERVKE