Gene Cpin_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1630 
Symbol 
ID8357772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1972030 
End bp1972584 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID644963810 
Productribosomal protein L6 
Protein accessionYP_003121327 
Protein GI256420674 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA TAGGTAAAAG TCCTATCAAA TTAGCAAGTG GTGTAACAGC TACTGTTTCT 
GCTGCTAATG AACTGACTGT AAAAGGTCCT AAAGGTGAAC TGAAAAGAAG CATCGACAGG
GATATCAAGA TAGAAGTGGC CGATGGCGTT CTTACAGTAG TTCGTCCGAC AGATCAGATC
CGTCACCGTG CACTGCATGG TCTGTACCGT GCATTGATCA ACAACATGGT GATCGGTGTA
ACTGAAGGTT TCAAAAAACA ACTGGAACTT GTCGGTGTAG GTTATAAAGC CGCTAACCAG
GGCCAACTGC TTGACCTGTC TTTGGGTTAC TCTCACAACA TCGTGATTGA AATCCCTAAA
GAACTGAAAG TAGCTACCCT GACTGAAAAG GGTTCTAACC CTAAAATCAT GCTGGAAGGT
ATCGACAACC AGCTGCTGGG TCAGGTAGCC GCTAAAATCC GTAGCCTGCG TAAACCAGAG
CCGTACAAAG GTAAAGGTGT TCGCTATAGC GATGAAGTGG TTCGTAAGAA AGCAGGTAAG
TCTGCAGGTA AATAA
 
Protein sequence
MSRIGKSPIK LASGVTATVS AANELTVKGP KGELKRSIDR DIKIEVADGV LTVVRPTDQI 
RHRALHGLYR ALINNMVIGV TEGFKKQLEL VGVGYKAANQ GQLLDLSLGY SHNIVIEIPK
ELKVATLTEK GSNPKIMLEG IDNQLLGQVA AKIRSLRKPE PYKGKGVRYS DEVVRKKAGK
SAGK