Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1627 |
Symbol | |
ID | 8357769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1970434 |
End bp | 1971009 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644963807 |
Product | ribosomal protein L5 |
Protein accession | YP_003121324 |
Protein GI | 256420671 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA CTACATATAA ACCCAGACTG CAGACTAAAT ACCGCGAAGA AGTGGTAAAT ACACTGCACA AGAAATTCAA CTACAAGAGC GTAATGCAGG TGCCACGTTT GGTAAAGATC TGTCTGAACC AAGGTATCAA TGGCGCTGTT GGAGATAAGA AACTGGTAGA TATTGCTGTT GACGAAATGA CCCGTATCTC AGGTCAGAAA GCGATCGCTA CTTTATCTAA GAAAGATATC TCTAACTTCA AACTGAGAAA GCACATGCCG ATTGGTGCCC GCGTAACACT GCGTGGTAAC AATATGTATG ACTTCCTGGA TCGTCTGATC GCAGTTTCCC TGCCACGTGT ACGTGACTTC AAAGGTGTGA ATGAAAAAGC TTTCGATGGC CGCGGTAACT ATACCCTGGG TATCACTGAG CAGATCATCT TCCCTGAGAT CGATATCGAT AAAGTAACAA AGATCTCCGG TATGGATATC ACTTTCGTTA CTACGGCGCA GACCAACGAA GAAGCTTATG AGCTTCTGAA AGAACTGGGT ATGCCGTTCA AGAATATCAA GAAGGATAAT CAATAA
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Protein sequence | MANTTYKPRL QTKYREEVVN TLHKKFNYKS VMQVPRLVKI CLNQGINGAV GDKKLVDIAV DEMTRISGQK AIATLSKKDI SNFKLRKHMP IGARVTLRGN NMYDFLDRLI AVSLPRVRDF KGVNEKAFDG RGNYTLGITE QIIFPEIDID KVTKISGMDI TFVTTAQTNE EAYELLKELG MPFKNIKKDN Q
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