Gene Cpin_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1627 
Symbol 
ID8357769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1970434 
End bp1971009 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID644963807 
Productribosomal protein L5 
Protein accessionYP_003121324 
Protein GI256420671 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA CTACATATAA ACCCAGACTG CAGACTAAAT ACCGCGAAGA AGTGGTAAAT 
ACACTGCACA AGAAATTCAA CTACAAGAGC GTAATGCAGG TGCCACGTTT GGTAAAGATC
TGTCTGAACC AAGGTATCAA TGGCGCTGTT GGAGATAAGA AACTGGTAGA TATTGCTGTT
GACGAAATGA CCCGTATCTC AGGTCAGAAA GCGATCGCTA CTTTATCTAA GAAAGATATC
TCTAACTTCA AACTGAGAAA GCACATGCCG ATTGGTGCCC GCGTAACACT GCGTGGTAAC
AATATGTATG ACTTCCTGGA TCGTCTGATC GCAGTTTCCC TGCCACGTGT ACGTGACTTC
AAAGGTGTGA ATGAAAAAGC TTTCGATGGC CGCGGTAACT ATACCCTGGG TATCACTGAG
CAGATCATCT TCCCTGAGAT CGATATCGAT AAAGTAACAA AGATCTCCGG TATGGATATC
ACTTTCGTTA CTACGGCGCA GACCAACGAA GAAGCTTATG AGCTTCTGAA AGAACTGGGT
ATGCCGTTCA AGAATATCAA GAAGGATAAT CAATAA
 
Protein sequence
MANTTYKPRL QTKYREEVVN TLHKKFNYKS VMQVPRLVKI CLNQGINGAV GDKKLVDIAV 
DEMTRISGQK AIATLSKKDI SNFKLRKHMP IGARVTLRGN NMYDFLDRLI AVSLPRVRDF
KGVNEKAFDG RGNYTLGITE QIIFPEIDID KVTKISGMDI TFVTTAQTNE EAYELLKELG
MPFKNIKKDN Q