Gene Cpin_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1620 
Symbol 
ID8357762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1967236 
End bp1967595 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content46% 
IMG OID644963800 
Productribosomal protein L22 
Protein accessionYP_003121317 
Protein GI256420664 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG TAGCTAAGCT TAATAATAAT CCGACATCTA CCCGCAAAAT GCGTTTGCTG 
GCGGACCTGA TCCGTGGTCT GGATGTGGAA AAAGCTCTGA ATATTTTGAA GTTCCATCCA
AAGCATCCCA GCGTTCCGTT GGAAAAACTG CTGTTGTCTG CAATCGCTAA CTGGAAAGTG
AAGAACGAAG GCACAAGGGT AGAAGATGCT AATCTGCAGG TTAAAACCAT CTTCGTTGAT
GGCGGCCGTA TCCTGAAAAG AATGCGTCCA GCTCCACAGG GTAGAGGTTA TCGCGTTCGT
AAAAGAAGCA ACCACGTAAC ACTTGTTGTT GATAGCCGTC CTGCAGTGGA AGCAAAATAA
 
Protein sequence
MEAVAKLNNN PTSTRKMRLL ADLIRGLDVE KALNILKFHP KHPSVPLEKL LLSAIANWKV 
KNEGTRVEDA NLQVKTIFVD GGRILKRMRP APQGRGYRVR KRSNHVTLVV DSRPAVEAK