Gene Cpin_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1607 
Symbol 
ID8357749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1950953 
End bp1951420 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content46% 
IMG OID644963787 
Productribosomal protein S7 
Protein accessionYP_003121304 
Protein GI256420651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.398796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC AAGCCGCAAA GAAGATGCCT CTGGCTCCGG ATCCGCGCTT TAACGACAAA 
CTGGTTACCC GGTTTGTTAA CAACGTGATG GAACAGGGCA AAAAGAGCAT TGCCTATAGG
ATATTTTATG ATGCGATTGA CAGAGTAAGC CAGATAACCA ATGATAATGG TTACGAGGTT
TGGAAGAAAG CTCTGGCAAA CGTAACTCCT GCTGTAGAAG TTAGAAGCCG TCGTATTGGT
GGTGCTACCT TCCAGATCCC TTCTGAGGTT CGTCCTGACA GAAAGGTTTC TCTGTGCATC
AAATGGTTAA TCCGTTATGC TGGTGAGAGA AATGGTAAGA GCATGGCTGA GAAACTGGCT
AACGAAATCG TAGCGGCAAG CAAAGGTGAA GGTGGCGCTT TCAAAAAGAA AGAAGATACT
CACCGTATGG CTGAAGCGAA CAAGGCATTC TCCCACTTCA GGATCTAA
 
Protein sequence
MRKQAAKKMP LAPDPRFNDK LVTRFVNNVM EQGKKSIAYR IFYDAIDRVS QITNDNGYEV 
WKKALANVTP AVEVRSRRIG GATFQIPSEV RPDRKVSLCI KWLIRYAGER NGKSMAEKLA
NEIVAASKGE GGAFKKKEDT HRMAEANKAF SHFRI