Gene Cpin_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1606 
Symbol 
ID8357748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1950539 
End bp1950919 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content46% 
IMG OID644963786 
Productribosomal protein S12 
Protein accessionYP_003121303 
Protein GI256420650 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.524218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTA TACAACAATT AGTAAGAAAA GGAAGAGAAA TTATCCGGGC TAAATCCAAG 
TCCAGGGCTT TAGATAGCTG TCCTCAGCGT CGTGGTGTAT GTACCCGTGT GTACACAACC
ACTCCTAAAA AGCCAAACTC TGCGCTGCGC AAGGTTGCAA AGGTGCGTTT GACAAACAAA
GTAGAGGTGA TTGCTTACAT CCCAGGTGAA GGTCACAACC TTCAGGAGCA CTCTATCGTG
CTGATCCGTG GTGGTAGGGT GAAAGATCTG CCAGGTGTTC GTTACCACAT CGTTCGTGGT
TCTCTGGATA CAGCAGGTGT GAAAGATAGA AAGCAGAGCC GTTCCAAGTA TGGTACCAAA
AAGGAAAAGG CTAAGAAATA A
 
Protein sequence
MPTIQQLVRK GREIIRAKSK SRALDSCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNK 
VEVIAYIPGE GHNLQEHSIV LIRGGRVKDL PGVRYHIVRG SLDTAGVKDR KQSRSKYGTK
KEKAKK