| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1604 |
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| Symbol | |
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| ID | 8357746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1948577 |
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| End bp | 1949683 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963784 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_003121301 |
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| Protein GI | 256420648 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.591229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGACA ATCCAACGAC AAATGCAGTA CTAGAAGAGG CGGTTAAGAA AATTAAAGTG
ACCCGGACGG CTCAGAGCCG GATCAATGAG ATTGATTTTA ACAACCTGGT ATTCGGGAAA
AAGTACGCCG ATCACATGCT GGTGGCTGAC TTTGACGGAA AAGAATGGAA AAATGCGGAG
ATTTTACCTT TTCAGCATCT TTCTGTAAGT CCATCCAATG CCGCCTGGCA CTATGGTCAG
GCTATCTTCG AAGGTATTAA GGCATACAAG GATCAGGAAG GTAATCCTAT GATCTTCCGT
CCGTATGACA ACTATGCACG TTTTAACACT TCCGCAGAGA GAATGGGTAT GCCGGATGTT
CCTGAATGGT TATTCATCGG GGGCATGGAC ATGCTGATCG ATCTCGACCG GAACTGGGTG
CCTTCCAATG ACGGTTGCTC ACTGTACCTG CGACCTTTCA TGATTGCAGC AGATGAATTC
ATCGGTGTAA AGCCTTCTGA CACTTATAAA TTCGTTATTA TCAATTCTCC GTCCGGTCCG
TATTTTAATA AGCCGATTAA ATTGCTCGTA CAGGATAAGT ATATCCGTGC TTTTCCTGGC
GGCGTAGGTT ATGCCAAGGC AGCAGGCAAC TATGGCGGAG CGATGTATCC GACAATGCAG
GCACGTAAAC AGGGATTTGA CCAGATCCTT TGGGTGGACG GCCTTGAGTA TAAATATTTA
CAGGAGTGTG GTACAATGAA CGTATTTGCG ATCATCGGTA ATAAAGCCAT CACACCTGAT
CTGAACCAGG GCACTATCCT TGCAGGGGTA ACCAGAACGA GCGTAATGGA CGTACTGTCC
GATATGGGAC TGACTGTAGA GGAGCGTCCT GTTTCTATTG AAGAGGTGGT AGCAGCATGG
AAAGATGGTA CCCTGCGTGA GGTATTTGGT ACAGGTACTG CATCCAGCGT AGCGTATGTG
GAAGAACTGC GCTATAAAGA GCATGAGATC CGCCTGGATA CTACCAGATA TGCGGTAGGG
GCAGAGCTGC TGGAACGTCT GGATGCTATC CGTACAGGAA AGGCAGACGA TACCCGCCAC
TGGAACTATA AAGTATCAAA ACACTAA
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| Protein sequence | MVDNPTTNAV LEEAVKKIKV TRTAQSRINE IDFNNLVFGK KYADHMLVAD FDGKEWKNAE
ILPFQHLSVS PSNAAWHYGQ AIFEGIKAYK DQEGNPMIFR PYDNYARFNT SAERMGMPDV
PEWLFIGGMD MLIDLDRNWV PSNDGCSLYL RPFMIAADEF IGVKPSDTYK FVIINSPSGP
YFNKPIKLLV QDKYIRAFPG GVGYAKAAGN YGGAMYPTMQ ARKQGFDQIL WVDGLEYKYL
QECGTMNVFA IIGNKAITPD LNQGTILAGV TRTSVMDVLS DMGLTVEERP VSIEEVVAAW
KDGTLREVFG TGTASSVAYV EELRYKEHEI RLDTTRYAVG AELLERLDAI RTGKADDTRH
WNYKVSKH
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