Gene Cpin_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1601 
Symbol 
ID8357743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1946769 
End bp1947197 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content44% 
IMG OID644963781 
Productesterase 
Protein accessionYP_003121298 
Protein GI256420645 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAG TTAAAATAGA TATACCGGAA AAACTGGGTT ATACGACACA GATACCGGTT 
AGAGTAACAG ATGTAAACTA CGGCGGACAC GTAGGCAATG ATGCTATCCT GTCCATTCTT
CACCAGGCCA GGATCAACTA TCTGCACGCC ATGGGGCTGG AAGAAAGAGG TCCGGAAACC
GGCCTTATCA TGGCTGACGC TGCACTCGTA TATAAAGGAG AAGGATTCCT CAAAGATATC
TTTGATATCG CCATCGGAGC AGCTGACATC TCTCCTTTTG GCTTTGACAT CTATTACAGG
ATCACTACCG TCCGTGATGG TAAAACCATC CTGATCGCGG AAGCGAAATC TGGTATGATC
TTCTTTGATT ATATCAATAG GAAAGTCTCC AGACTTCCGG AAGAATGGAA AGAAAAAATA
TCTGCATAA
 
Protein sequence
MARVKIDIPE KLGYTTQIPV RVTDVNYGGH VGNDAILSIL HQARINYLHA MGLEERGPET 
GLIMADAALV YKGEGFLKDI FDIAIGAADI SPFGFDIYYR ITTVRDGKTI LIAEAKSGMI
FFDYINRKVS RLPEEWKEKI SA