Gene Cpin_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1562 
Symbol 
ID8357704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1905374 
End bp1905715 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content44% 
IMG OID644963742 
Productprotein of unknown function DUF1508 
Protein accessionYP_003121259 
Protein GI256420606 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC CCAAATTTGA ACTTTTCTCC GGTATCGGGA AGAATGACTA TTTCTTTAAC 
CTGAAAGCCG GCAATGGAGA GAAAATCCTG GGAAGTGAAA GCTATACCTC AAAACATGCC
GCTGTACACA GCATCGCTTC CGTAAAAAGA AACGCTCCAT ATTATAAACA GTACGAACGA
AGATTTAATA GTGATAACAA CAGTTACACG TTCGTACTAA AAGCTGAGAA CGGAGAAATT
ATCGGTCGAA GTGAGACCTA TCCCTCTGCC TATAGCCGTG ACGAGGGCAT TGAAGCCGTA
AGACGAAATG CCCCGGAAGC ACCCACTGAT GATCTGACCT GA
 
Protein sequence
MKNPKFELFS GIGKNDYFFN LKAGNGEKIL GSESYTSKHA AVHSIASVKR NAPYYKQYER 
RFNSDNNSYT FVLKAENGEI IGRSETYPSA YSRDEGIEAV RRNAPEAPTD DLT