| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1551 |
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| Symbol | |
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| ID | 8357693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1893162 |
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| End bp | 1894673 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963731 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003121248 |
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| Protein GI | 256420595 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.58784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAA TCAGATTTTA CACATATACA GTAGCGCTGC TCTTAGGATT ATCAGCCTGC
AACAAACAAC TGGATACCGC TCCTTCCAAT GCGGTATCAG AAGATATCGT ACTGAAAAAT
GTAGCCAACC TTACCACCAT CTCAGAAGGT ACCTGGGCGG CTATGATGGA TGATTTTTAT
GGCGGCACCT ACAGTAATCC CGGTTTTAAG ACCATTGCGC TTACCAGCGA TGCCATGGCT
AATGACGTAG CACTGATCAC TACCAAGTAT GGTTTTCCTA CAGCATATCG TTTCACACAG
ATGAATGATA AGACACAGTC ACGTGTGACA GCTATATGGG GTCAACTATA CAAGATCATC
AACAACAGCA ATATTATCAT TGCGAATGTG GACAGAGTTG AAGGAGATCT GACCAGTAAA
AAGGTTCTCA AGGGACAGGC ACTCGCATTG AGGGCACATA CTTATCTGAC AATCGCTTCA
TTTTACCAGT ATTCTTATCT GAAAGACTCA ACGGCGAAAA CAGCCCCTGT TTATACCACA
CCGACGACGG CGAGTACACA GGGTAACCCT AAAGCCTCTC TCAAAGAGAT CTATGAAGTG
ATCTTTGCAG ACTTGCAACA GGCAAGAGAA CTACTGGCAG GTTATGATCG TCCGGCGAAA
TACAAGATCA ATGTTGACGT GGTAAATGGT TTACTGGCAC GTGCTTACCT GAATACCGGC
AGATGGGCAT TTGCGGCGGC AGCGGCTAAT GAGGCATTGC AAAACTATCC ATTGATGGCG
CCATCTGAAT ACAGTAAAGG CTTTAACGAC GCCGGCAATT CCGAGTGGAT CTGGGGACAT
TCTGAAATAC CTAGTCAGAG TGATGGTAGT TACAGTTTCC ACTTCCTGGA CGTATCATCT
GCCTCTTCTT ATTACTACAG TTATATGGCT GATCCATTCT TCGGAGAATT ATTCGAAACA
GGCGACATCC GTAAAACGCT GTTTTCCTGG GACGGTTCAG CTGCCGCCAG AGAGGGATAC
CTGCAATATA AGAAGTTCAA ATTCAAGGCC GATCAGACCG CAGACCTGGT CCTCATGAGA
AGCGCAGAAG CCTTGCTGAT CAAAGCAGAA GGTTATGCCC GTGCTGGTAG TATTCCGGAG
GGTATTACTG CTTTGAACCA GCTTCGCACT GCCAGAGGCG CCAAATTGTT TGATGCTAAC
GGCGCCACAG CAGAGAACCT GATCAAAGAA ATCCTGATAG AGAGAAGAAA AGAACTGTGG
GGCGAAGGTT TTGGTTTATC TGATATTATC CGTACCCAGC AGGCAGTGGC GCGCAAACCT
TATGTAGATG CCAATGGCAA TGATATCAAG GTAACAGTTG TAAAACCTGA TGGTACTACC
AAAGAAGTAC CAGCCAGGTA TCATACAGCG CTGACCTTCT CAGATGGGAC AGCTTTTGCG
GCCAACAGCC CTTACTATAT ATTCGTGATC CCACAGGGTG AAGAGCAGAA CAATCCTAAT
CTCAACAAAT AG
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| Protein sequence | MQSIRFYTYT VALLLGLSAC NKQLDTAPSN AVSEDIVLKN VANLTTISEG TWAAMMDDFY
GGTYSNPGFK TIALTSDAMA NDVALITTKY GFPTAYRFTQ MNDKTQSRVT AIWGQLYKII
NNSNIIIANV DRVEGDLTSK KVLKGQALAL RAHTYLTIAS FYQYSYLKDS TAKTAPVYTT
PTTASTQGNP KASLKEIYEV IFADLQQARE LLAGYDRPAK YKINVDVVNG LLARAYLNTG
RWAFAAAAAN EALQNYPLMA PSEYSKGFND AGNSEWIWGH SEIPSQSDGS YSFHFLDVSS
ASSYYYSYMA DPFFGELFET GDIRKTLFSW DGSAAAREGY LQYKKFKFKA DQTADLVLMR
SAEALLIKAE GYARAGSIPE GITALNQLRT ARGAKLFDAN GATAENLIKE ILIERRKELW
GEGFGLSDII RTQQAVARKP YVDANGNDIK VTVVKPDGTT KEVPARYHTA LTFSDGTAFA
ANSPYYIFVI PQGEEQNNPN LNK
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