Gene Cpin_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1549 
Symbol 
ID8357691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1891862 
End bp1892248 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content41% 
IMG OID644963729 
Producthypothetical protein 
Protein accessionYP_003121246 
Protein GI256420593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTC GTTTTAGTAT GCCATACCTG TTATTGGCTA TTCTTATTTT CGCTGTAGAA 
GTGCTGATCG CCTTATATGT ACACGACGAT TTAATCCGTC CTTATTTTGG AGATGTACTG
GTCGTTGTTT TGATTTATTG TTTTGTTCGC AGTTTTATCC AGGCGCCTGT AGTACCTGTT
GCATTGGGGG TACTGATATT CTCTTACCTG GTGGAGATGT TACAGTATTT CAAAGTGGTG
AAGCTATTGG GGCTGCAGCA CTCCAGGGCG GCGAATATCA TTATCGGGAA TTATTTTACC
TGGGCGGATA TTATATGTTA TACGATAGGA ATTGGGGGAA CTATACTGGC GGAGAAGCTA
ATAGCGTTAA AAAGAAGTAA TGTGTAG
 
Protein sequence
MSFRFSMPYL LLAILIFAVE VLIALYVHDD LIRPYFGDVL VVVLIYCFVR SFIQAPVVPV 
ALGVLIFSYL VEMLQYFKVV KLLGLQHSRA ANIIIGNYFT WADIICYTIG IGGTILAEKL
IALKRSNV