Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1546 |
Symbol | |
ID | 8357688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1890359 |
End bp | 1890847 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963727 |
Product | dual specificity protein phosphatase |
Protein accession | YP_003121244 |
Protein GI | 256420591 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGA AAATTTACTG GATACAGTCC TTCGAAAAAA ATGCCCGGAT TGGCATTATG CCTCGTCCGC GCGGTGGAGA TTGGCTGGAG GATGAAATCA GCCATTTTAA GCGACAGAAC GTTACACTAA TTGTTTCTCT CCTTGAAAAC GATGAGGTCG GAGAGTTAGA CCTAAGAAAG GAAGAGGTAT ACTGTCTGCA ATATGGTATC GGATTCCTCC GGTTTCCGAT TAAAGACAGG GATGTTCCTG TAAACGCCCG AGGTCTGATT CAGACATTAT TAAAGCACCT TGAGGAAGGG GCTAAAATTG TTATTCATTG CCGGATGGGC ATAGGAAGGT CAGCTATTAT AGCGGGCGCT GTCCTTGTCT CAAAGGGATA TAAAGCCAGT GCTGTATTAA CTCAGATCAG TGAGGTACGC GGCCTTAAAG TACCAGACAC TCAGGAACAG GTGAGCTGGC TGATAGGTAT GGAAACCCAT CCTTATTGA
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Protein sequence | MPTKIYWIQS FEKNARIGIM PRPRGGDWLE DEISHFKRQN VTLIVSLLEN DEVGELDLRK EEVYCLQYGI GFLRFPIKDR DVPVNARGLI QTLLKHLEEG AKIVIHCRMG IGRSAIIAGA VLVSKGYKAS AVLTQISEVR GLKVPDTQEQ VSWLIGMETH PY
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