Gene Cpin_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1546 
Symbol 
ID8357688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1890359 
End bp1890847 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID644963727 
Productdual specificity protein phosphatase 
Protein accessionYP_003121244 
Protein GI256420591 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGA AAATTTACTG GATACAGTCC TTCGAAAAAA ATGCCCGGAT TGGCATTATG 
CCTCGTCCGC GCGGTGGAGA TTGGCTGGAG GATGAAATCA GCCATTTTAA GCGACAGAAC
GTTACACTAA TTGTTTCTCT CCTTGAAAAC GATGAGGTCG GAGAGTTAGA CCTAAGAAAG
GAAGAGGTAT ACTGTCTGCA ATATGGTATC GGATTCCTCC GGTTTCCGAT TAAAGACAGG
GATGTTCCTG TAAACGCCCG AGGTCTGATT CAGACATTAT TAAAGCACCT TGAGGAAGGG
GCTAAAATTG TTATTCATTG CCGGATGGGC ATAGGAAGGT CAGCTATTAT AGCGGGCGCT
GTCCTTGTCT CAAAGGGATA TAAAGCCAGT GCTGTATTAA CTCAGATCAG TGAGGTACGC
GGCCTTAAAG TACCAGACAC TCAGGAACAG GTGAGCTGGC TGATAGGTAT GGAAACCCAT
CCTTATTGA
 
Protein sequence
MPTKIYWIQS FEKNARIGIM PRPRGGDWLE DEISHFKRQN VTLIVSLLEN DEVGELDLRK 
EEVYCLQYGI GFLRFPIKDR DVPVNARGLI QTLLKHLEEG AKIVIHCRMG IGRSAIIAGA
VLVSKGYKAS AVLTQISEVR GLKVPDTQEQ VSWLIGMETH PY