Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1523 |
Symbol | |
ID | 8357664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1868766 |
End bp | 1869428 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963703 |
Product | cytochrome c assembly protein |
Protein accession | YP_003121221 |
Protein GI | 256420568 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC ATTGGTGGAA AGCTCTAGCA GTAATTATCC TCGTATACGT TATCATCGCA GGATTTACTA TTGAGATACC GATTATCGGC ACAAACGGGC AGTCTTCCCG CGGCCTTTTC TTTCACGTTC CCATGTGGAT ATGCATGTAT ACCATGTTCA CTATCTCCGT GATCAATTCC GTTCTCTATC TTTCTAAATA CGATCTTCGT AGAGATGCAT ACGCAAGTTC TGCTGCGAGT GTTGGGGTGT TTTATGGCAT CCTGGGCTTC GCCACGGGTA CATTATGGGC GACCTATACC TGGGGTGGTT CCTTTACCCG CGATCCTAAA CAGATGCTGA CGGCTGTCGC ACTCATGATC TATATGGCTT ACCTCGTATT ACGTTTGTCC ATTCCGGACA TCGATAAGCG TGCGAGGATC TCTGCCGTGT TTAACATTTT CGCATTTGCT TTGTTGATTC CCTTAACGTA TATCATCCCG CGCATGGTCG ATTCCCTGCA TCCCGGAAGC GCCACCACGC CTGGATTTGC ATCCAGTGAC ACCGACAACC ACATGAAATG GGTTCTCTAT CCTGCCTTCA TTGGTTGGAC CCTGCTGAGT GTATGGATTT ACACACTGCT TGTACGGTAC AAAAAATTAG AGCTAAAAAA TATTTTTAAA TGA
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Protein sequence | MAKHWWKALA VIILVYVIIA GFTIEIPIIG TNGQSSRGLF FHVPMWICMY TMFTISVINS VLYLSKYDLR RDAYASSAAS VGVFYGILGF ATGTLWATYT WGGSFTRDPK QMLTAVALMI YMAYLVLRLS IPDIDKRARI SAVFNIFAFA LLIPLTYIIP RMVDSLHPGS ATTPGFASSD TDNHMKWVLY PAFIGWTLLS VWIYTLLVRY KKLELKNIFK
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