Gene Cpin_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1523 
Symbol 
ID8357664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1868766 
End bp1869428 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID644963703 
Productcytochrome c assembly protein 
Protein accessionYP_003121221 
Protein GI256420568 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC ATTGGTGGAA AGCTCTAGCA GTAATTATCC TCGTATACGT TATCATCGCA 
GGATTTACTA TTGAGATACC GATTATCGGC ACAAACGGGC AGTCTTCCCG CGGCCTTTTC
TTTCACGTTC CCATGTGGAT ATGCATGTAT ACCATGTTCA CTATCTCCGT GATCAATTCC
GTTCTCTATC TTTCTAAATA CGATCTTCGT AGAGATGCAT ACGCAAGTTC TGCTGCGAGT
GTTGGGGTGT TTTATGGCAT CCTGGGCTTC GCCACGGGTA CATTATGGGC GACCTATACC
TGGGGTGGTT CCTTTACCCG CGATCCTAAA CAGATGCTGA CGGCTGTCGC ACTCATGATC
TATATGGCTT ACCTCGTATT ACGTTTGTCC ATTCCGGACA TCGATAAGCG TGCGAGGATC
TCTGCCGTGT TTAACATTTT CGCATTTGCT TTGTTGATTC CCTTAACGTA TATCATCCCG
CGCATGGTCG ATTCCCTGCA TCCCGGAAGC GCCACCACGC CTGGATTTGC ATCCAGTGAC
ACCGACAACC ACATGAAATG GGTTCTCTAT CCTGCCTTCA TTGGTTGGAC CCTGCTGAGT
GTATGGATTT ACACACTGCT TGTACGGTAC AAAAAATTAG AGCTAAAAAA TATTTTTAAA
TGA
 
Protein sequence
MAKHWWKALA VIILVYVIIA GFTIEIPIIG TNGQSSRGLF FHVPMWICMY TMFTISVINS 
VLYLSKYDLR RDAYASSAAS VGVFYGILGF ATGTLWATYT WGGSFTRDPK QMLTAVALMI
YMAYLVLRLS IPDIDKRARI SAVFNIFAFA LLIPLTYIIP RMVDSLHPGS ATTPGFASSD
TDNHMKWVLY PAFIGWTLLS VWIYTLLVRY KKLELKNIFK