Gene Cpin_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1500 
Symbol 
ID8357641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1843432 
End bp1843905 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID644963680 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003121198 
Protein GI256420545 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGTT CACTGGATGA GCAGTTAGAG CAGCATCTGG CGCAACGTCA ACAGAGTCTT 
ATCAGAATGT TAGGTCTGTT GAAAAAGGAC ATGGATTGTA GAATCATGCA AAAGCTACAG
CAGAAAGGTT ACACAAATTT CAAACTGGGC GACCTTGTGC TGATAGTGAA TATAGATCCA
CAAGGGATCA TCAACAACGA ACTGGCAAGA AAAGCCCGTA TTACGAAACA GGCCATGAGT
AAAGTAGTGA AGAACCTGGA AGCAGGCGGC TTTATTCACA CCAGTAAACA CCTCAGCGAT
GCCCGTGCAG CGGTGATCTC TCTGACAGAT GAAGGCAAAA AACTGATCAT CTGTGCGGCG
GAAAGCTTCC AGGAGATACA AGCTGAATAT ACAGAGATCA TCGGTGAGCA GGATGCTGAC
GCATTGAAGC AGATCCTGCG TAAACTGGTA TTCAGTTTAC ACCCCGAATG CTGA
 
Protein sequence
MHSSLDEQLE QHLAQRQQSL IRMLGLLKKD MDCRIMQKLQ QKGYTNFKLG DLVLIVNIDP 
QGIINNELAR KARITKQAMS KVVKNLEAGG FIHTSKHLSD ARAAVISLTD EGKKLIICAA
ESFQEIQAEY TEIIGEQDAD ALKQILRKLV FSLHPEC