Gene Cpin_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1473 
Symbol 
ID8357614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1808382 
End bp1808762 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content50% 
IMG OID644963653 
Producturease, beta subunit 
Protein accessionYP_003121171 
Protein GI256420518 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0832] Urea amidohydrolase (urease) beta subunit 
TIGRFAM ID[TIGR00192] urease, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.515544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTATGA TACCAGGTGA ATACTTTATA GCGCCCGGCG TTATAGACGC CAACAAGGGC 
CGCAGTGTTG CATCCGTCCG TGTAGTCAAT ACCGGCGACA GACCTGTACA GATCGGCTCT
CATTGTCATT TCTTCGAAGT CAACAGAATG CTTTCCTTTA ACAGGGAAAC CGCTTTTGGT
ATGCGGCTGA ATATTGCCGC GGGTACGGCT GTGCGTTTTG AGCCCGGAGA GGAAAAGACA
GTAGAACTGG TTACCCTCGG TGGTAACCGC CGTGCGTATG GTATGAATAA CCTGGTTAAC
GGAACTACTG TGGGGATTGA AGCCCGCGAT AAAGCCATGC AACAGGTAGT ACAGCAACAA
TTTAAACATC AGCCGGAATG A
 
Protein sequence
MRMIPGEYFI APGVIDANKG RSVASVRVVN TGDRPVQIGS HCHFFEVNRM LSFNRETAFG 
MRLNIAAGTA VRFEPGEEKT VELVTLGGNR RAYGMNNLVN GTTVGIEARD KAMQQVVQQQ
FKHQPE