Gene Cpin_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1465 
Symbol 
ID8357606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1796388 
End bp1797449 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content48% 
IMG OID644963645 
Producthypothetical protein 
Protein accessionYP_003121163 
Protein GI256420510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.762448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TTCTGACTGT ACTGCTCGCA GCAACAATGG CCAATGTTGC TTTTGCGCAG 
GAACAATCCA GAGAAATCTG GTCTAAAAAG AAAGCTGCTA AATGGTATAA GCAACATGCC
TGGCAGCGGG GAAGCAACTT TATTCCCAGC TATGCTATCA ATCAGCTGGA AATGTGGCAG
GCAGAGACCT TTGATACTGC CGTAATTAAC AGGGAACTGG GGTATGCAGC AGGTATCGGA
ATGAATTCCA TGCGTGTATT CCTGCACCAT GCGGCCTGGG AACAGGATCC GGCAGGATTT
AAACAACGTA TTGGTACTTA CCTGGACATC TCAGACAGAA ACGGCATCTC CACCACCTTC
GTACTGTTTG ATGACTGCTG GAATAATACT TATGCTACAG GCAAACAACC GGCGCCTAAA
ACCGGTATAC ATAACTCAGG CTGGTTACAG GATCCGGGTG TACGCCGGGA AGTTTCTCCT
GCACTGACTG ATACCCTGGA ACGCTATGTA AAAGATGTAC TTACCAGCTT CGGGAATGAT
AAACGCATCC TGCTGTGGGA TCTTTATAAC GAGCCGGGTA ACTCTAATTA TGGCGATAAA
AGCATGGATC TGCTGAAGCA GGTGTTCGTC TGGGCAAGAC AGGTGCCTGT TACCCAGCCG
GTATCGGCAG GCGTATGGAA TAAAAGCCTG ACAGACCTGA ACGTGTTCCA GCTGAACAAT
TCGGACGTGA TCACTTATCA TAATTATGCG GATGAAAAAG AACACCAGCA GACGATTGAC
AGTCTCCGGA AGTTTGGCCG TCCGCTGATA TGTACAGAAT ACATGGCCCG CACAAGGGGC
AGCCTTTTCC AGAATATCAT GCCGTTACTG AAGAAAGAAA AAGTAGCTGC ATATAACTGG
GGGCTGGTAT CCGGAAAGAC CAATACGATC TATGCCTGGG ATACGCCGAT GAAAGATGGC
GGCGAACCCG CGGTATGGTT TCATGACATT TTCCGCCAGG ATGGTAAGCC TTATAGCACG
GAAGAAGTTA CAGTTATTAA ATCTTTGACT GGAGCGCAGT AA
 
Protein sequence
MKVFLTVLLA ATMANVAFAQ EQSREIWSKK KAAKWYKQHA WQRGSNFIPS YAINQLEMWQ 
AETFDTAVIN RELGYAAGIG MNSMRVFLHH AAWEQDPAGF KQRIGTYLDI SDRNGISTTF
VLFDDCWNNT YATGKQPAPK TGIHNSGWLQ DPGVRREVSP ALTDTLERYV KDVLTSFGND
KRILLWDLYN EPGNSNYGDK SMDLLKQVFV WARQVPVTQP VSAGVWNKSL TDLNVFQLNN
SDVITYHNYA DEKEHQQTID SLRKFGRPLI CTEYMARTRG SLFQNIMPLL KKEKVAAYNW
GLVSGKTNTI YAWDTPMKDG GEPAVWFHDI FRQDGKPYST EEVTVIKSLT GAQ