Gene Cpin_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1463 
Symbol 
ID8357604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1793733 
End bp1794857 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content46% 
IMG OID644963643 
Producthypothetical protein 
Protein accessionYP_003121161 
Protein GI256420508 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.600797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA CAACACCACA GCGCTTCCTG CCACTGGACG TATTCAGGGG ACTGACCGTA 
TGCTTTATGA TCATCGTGAA TACGCCGGGC TGGGACACCT CCTATTACAT ACTCAATCAC
GCACAGTGGA ACGGGTGTAC GCCGACAGAC ATGGTTTTCC CTTCCTTCCT CTTTGCGGTA
GGTAATGCCA TGAGCTTTAG TATGCGCAAA TTCCAGCAGC TGGAAAACAC GGCCGTTCTT
TCAAAGATCT TCCGTCGTAC CCTGCTGATA TTCCTCCTGG GTTTCCTGAT GTACTGGCTG
CCTTTTGTAA GACATACCGA GTCAGGACTG GAATTCATCC CACTTTCTGA TACACGTATT
TTAGGGGTAT TACAGCGTAT TGCGCTCTGT TATTGTTTTG CCTCCCTCCT GATCCATTAT
CTGCCTAAAA AAGCGGTGTG GGCGGTAAGC GCTGTTCTGT TACTGGGATA TTGGGCCGTT
ATGTACGCAT TTGGCGATCC GGCAGATCGA TATAGCCTGA CTGGTAATGC CGCCCTCCAT
TTTGATAAAC TGATCATGGG AGATAGTCAT CTGTATCATG GAGAAGGGAT CGCCTTCGAT
CCTGAAGGAT TATTAAGTAC ACTGCCGGCT ATCGTCAATG TGATCGCTGG TTACTATACC
GGTTTATTCA TCCAGCAGGA AGGAAAGACG GGCAAAGGCC TGCGTAAATT ACTGCAGATG
GGCGCCTTGC TGATACTCGT AGCGCTGGTA TGGAGTATGG CCTTCCCGAT CAACAAGAAA
CTCTGGACCA GCTCTTATGT ACTATACACC GTAGGTATCG ATTTACTGAT ACTCTCACTG
CTGATCTTTG TGATCGACTT TAAAAAACAG GAAGGATGGA CAAGTTTCTT TACTGTTTTC
GGTAAAAATC CGCTGTTCCT TTACCTCCTC TCAGAAGTAG TGGTGATATT CCTCTTCTTC
TTCCAGGCAG GTGGTATGAG CGTATACAGA TGGATCAATA CAAATATCTT CCAGCCGATA
GTACCGGGTA AACCGGGATC CCTGCTATTT GCGTTAGTAT ATATGTTATT CTGTTGGAGT
GTCGGCAAGA TACTTGATAA AAAGCGTATA TACGTACGTG TTTAG
 
Protein sequence
MTNTTPQRFL PLDVFRGLTV CFMIIVNTPG WDTSYYILNH AQWNGCTPTD MVFPSFLFAV 
GNAMSFSMRK FQQLENTAVL SKIFRRTLLI FLLGFLMYWL PFVRHTESGL EFIPLSDTRI
LGVLQRIALC YCFASLLIHY LPKKAVWAVS AVLLLGYWAV MYAFGDPADR YSLTGNAALH
FDKLIMGDSH LYHGEGIAFD PEGLLSTLPA IVNVIAGYYT GLFIQQEGKT GKGLRKLLQM
GALLILVALV WSMAFPINKK LWTSSYVLYT VGIDLLILSL LIFVIDFKKQ EGWTSFFTVF
GKNPLFLYLL SEVVVIFLFF FQAGGMSVYR WINTNIFQPI VPGKPGSLLF ALVYMLFCWS
VGKILDKKRI YVRV