Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1463 |
Symbol | |
ID | 8357604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1793733 |
End bp | 1794857 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963643 |
Product | hypothetical protein |
Protein accession | YP_003121161 |
Protein GI | 256420508 |
COG category | [S] Function unknown |
COG ID | [COG4299] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.600797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAACA CAACACCACA GCGCTTCCTG CCACTGGACG TATTCAGGGG ACTGACCGTA TGCTTTATGA TCATCGTGAA TACGCCGGGC TGGGACACCT CCTATTACAT ACTCAATCAC GCACAGTGGA ACGGGTGTAC GCCGACAGAC ATGGTTTTCC CTTCCTTCCT CTTTGCGGTA GGTAATGCCA TGAGCTTTAG TATGCGCAAA TTCCAGCAGC TGGAAAACAC GGCCGTTCTT TCAAAGATCT TCCGTCGTAC CCTGCTGATA TTCCTCCTGG GTTTCCTGAT GTACTGGCTG CCTTTTGTAA GACATACCGA GTCAGGACTG GAATTCATCC CACTTTCTGA TACACGTATT TTAGGGGTAT TACAGCGTAT TGCGCTCTGT TATTGTTTTG CCTCCCTCCT GATCCATTAT CTGCCTAAAA AAGCGGTGTG GGCGGTAAGC GCTGTTCTGT TACTGGGATA TTGGGCCGTT ATGTACGCAT TTGGCGATCC GGCAGATCGA TATAGCCTGA CTGGTAATGC CGCCCTCCAT TTTGATAAAC TGATCATGGG AGATAGTCAT CTGTATCATG GAGAAGGGAT CGCCTTCGAT CCTGAAGGAT TATTAAGTAC ACTGCCGGCT ATCGTCAATG TGATCGCTGG TTACTATACC GGTTTATTCA TCCAGCAGGA AGGAAAGACG GGCAAAGGCC TGCGTAAATT ACTGCAGATG GGCGCCTTGC TGATACTCGT AGCGCTGGTA TGGAGTATGG CCTTCCCGAT CAACAAGAAA CTCTGGACCA GCTCTTATGT ACTATACACC GTAGGTATCG ATTTACTGAT ACTCTCACTG CTGATCTTTG TGATCGACTT TAAAAAACAG GAAGGATGGA CAAGTTTCTT TACTGTTTTC GGTAAAAATC CGCTGTTCCT TTACCTCCTC TCAGAAGTAG TGGTGATATT CCTCTTCTTC TTCCAGGCAG GTGGTATGAG CGTATACAGA TGGATCAATA CAAATATCTT CCAGCCGATA GTACCGGGTA AACCGGGATC CCTGCTATTT GCGTTAGTAT ATATGTTATT CTGTTGGAGT GTCGGCAAGA TACTTGATAA AAAGCGTATA TACGTACGTG TTTAG
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Protein sequence | MTNTTPQRFL PLDVFRGLTV CFMIIVNTPG WDTSYYILNH AQWNGCTPTD MVFPSFLFAV GNAMSFSMRK FQQLENTAVL SKIFRRTLLI FLLGFLMYWL PFVRHTESGL EFIPLSDTRI LGVLQRIALC YCFASLLIHY LPKKAVWAVS AVLLLGYWAV MYAFGDPADR YSLTGNAALH FDKLIMGDSH LYHGEGIAFD PEGLLSTLPA IVNVIAGYYT GLFIQQEGKT GKGLRKLLQM GALLILVALV WSMAFPINKK LWTSSYVLYT VGIDLLILSL LIFVIDFKKQ EGWTSFFTVF GKNPLFLYLL SEVVVIFLFF FQAGGMSVYR WINTNIFQPI VPGKPGSLLF ALVYMLFCWS VGKILDKKRI YVRV
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