Gene Cpin_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1432 
Symbol 
ID8357573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1742953 
End bp1744086 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content43% 
IMG OID644963612 
Productmajor royal jelly protein 
Protein accessionYP_003121130 
Protein GI256420477 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT ATATCATCAC CCATATAAGC ATCCTCACGG TATTGCTGGC GGCCTGTGTT 
AACCAACCTA AGCAGCAATC CACGACAAAA GATACAACGC AAACAATCAG CGCAACGCCC
GTAGTACTGG AACAGGTATT TGCTGATAGT ACTTATCAGC TTACCGGTGT TGCCGTTTCT
GCTGATGGCA GATTATTCAC CAACTACCCC TATTGGCTGG ATAAACATAG CTATTCAGTT
GTGGAAGTAA AGGAAGGAAA GCCTGTGCCA TATCCGGATG CAGCCTGGAA TAGCTTTAAA
AAAGGTGACG ATGGAGCGCA TAAATTTGTG TGTGTACAAG CAGTGGTAGC TGATGAAAAA
GGGTATCTCT GGGTAGTGGA CGCTGCTGGT ATCGGACTGG GACCCGTGTA CCAACACAGC
AATAAAGTTG TAAAGATTAA CCTCGCTACG AATAAAGTAG AACGCATTTA TCATTTCCCG
GATAGCGTCA CTGCAAGTGA CAGTTATATC AATGATATCC GGGTAGATAA TGCTAACGGA
TTTGCATATA TGACCAGCTC TTCAAACGGC GGCATTGTTG TCCTGAATAC CAACACGGGG
CAGTCTCGTT TTGTATTACA TAACTCACCT TCTGTTTTGT CTGATACTAC TTATCATTTC
ACGATGGATG GCAGAGAATT AACTAAAACG GATGGCAGCA TTCCTAAGAT CAACTCTGAT
GGTATCGCAT TGTCTCCTGA TAAAGCCTGG TTATACTATA AGCCACTCAC GGATAACAGA
CTGTACCGCA TTAATACTGT ATTACTTCGT GACTTTTCCA TACCGGCACA GAAGATGAAT
AACAGCGTGG AAGATCTCGG TAAATTTATC ACCACAGATG GTATGGAATT CGATAAGAAT
GGTAACCTCT ACCTCGGAGA TCTGGAGAGA AGCAGTATTG TGAAAATTAC ACCCGACTTA
AAGATGCATA CCCTCGCAAC TGATACAGTA AAGCTTTCCT GGCCGGATAG TTACAGTATT
TCAGCGGATG GGTACCTGTA TATTTCCGCC TCACAGATAG CAAGGATGCC ATGGTTCAAC
AACAACCAGC ATCGCACAGT ATATCCATAT AAGATTTTCA AACTGAAACT GTAA
 
Protein sequence
MKTYIITHIS ILTVLLAACV NQPKQQSTTK DTTQTISATP VVLEQVFADS TYQLTGVAVS 
ADGRLFTNYP YWLDKHSYSV VEVKEGKPVP YPDAAWNSFK KGDDGAHKFV CVQAVVADEK
GYLWVVDAAG IGLGPVYQHS NKVVKINLAT NKVERIYHFP DSVTASDSYI NDIRVDNANG
FAYMTSSSNG GIVVLNTNTG QSRFVLHNSP SVLSDTTYHF TMDGRELTKT DGSIPKINSD
GIALSPDKAW LYYKPLTDNR LYRINTVLLR DFSIPAQKMN NSVEDLGKFI TTDGMEFDKN
GNLYLGDLER SSIVKITPDL KMHTLATDTV KLSWPDSYSI SADGYLYISA SQIARMPWFN
NNQHRTVYPY KIFKLKL