Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1371 |
Symbol | |
ID | 8357490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1638442 |
End bp | 1639992 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963529 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003121069 |
Protein GI | 256420416 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.768214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAAG GATTTAACAC TGCAATGGCA AATACACTGC TAGGTGAAGC GGGCATCTCG TCTGCCGGAC TACTGGAGCA ATTGCCGGTG GCAGCTTATA TATGTGATGT GAATGGCGGC ATCATATGTT GCAATGCGCG CGCTGTAAAA TTGTGGGGAA GAACACCCTC TGCGGGGGAA ACCATATTTC ATGACAGTAC GGTGATCGCT GCTGTATTAG AGGAGGGATT ACCCTTAGAA GATTGGCAAT CAACGATTAG TCATGCTGAT GATACTTCAG TGATCGTCAG GGGGAGTATT ACGCCGCTAA AAGACGGGGA TGGGAGCGTG ATCGGACTGA TACATTGTTT TGAGAAAGTG GCCGTAACCA TTGTTCCGGG TACAGAAATA CGGGCCGGTC ATCTCGCAGA ACTGAATGAG CAGCTTCAAC AGAGTGAGGA GAGATATTAT AAGATGATCG AAGAGGTGGA AGATTACGCC ATACTCTCCA TGGATAGATC AGGGATTATT CAGAACTGGA ACAAAGGCGC TGAAAAGATT AAGGGATACC ATGAATCTGA AATTGTCGGC CGGCACTTTA GTGTGTTTTA TCTACCGGAA GACCGTAAAC GACAATTACC GGAACAATTG ATTTCGGAAG CGATGAAGAC CGGAAAAGCG GCACATGAAG GCTGGCGGAT GCGTAAAGAC GGGACCCGTT TCTGGGGCAG TATTGTTATT ACAGCTTTAC ATGACGCAGA CCGGCAGGTG ATCGGCTTTT CAAAAGTCAC CCGCGACCTT ACAGAAAGAA AGCTGGCGGA AGACAGGATC CGACAGTATG CAAGCGACCT GGAATTTCAG AACAGGGAGC TGGAACAATT CGCTTATGCA GCGGCTCATG ATATGAAAGA ACCACTTCGG AAAGTACAGT TCTACAATAA CTATATCAAT GACAATGCAG CAGATGCATT ACCGGAAAAG GCGCGGGAAT ACCTGCACCG TTCCATTAAT GCAGCCTCCC GGATGCAGGG ACTCATTGAC GATCTGCTGA TGTATTCGCA GGCATCAGCC TTTTCTAAAG AACCCGAAGA CGTAGATCTG ACTACCATTG TAAATGAGGT ATTGGAGGCT CACCAGCCTA CAATAGACAA ATTGAAGGCG GTCGTCCATC TGGACCCCTT GCCGGTGATG CGTGTCATTC CGTTCCAGTT TAGTCAACTA TTTGATAACC TGATCAGTAA TGCACTCAAA TACCATCACC CTGAACGCCA TCCCCATATC AACATTACTA TTACAAAAAC GCAGTTGCCT GCAGAGGATA TCCTTCTTAA CAATGCGGAG CTGAATGGAT ATAAATTATC TGTATCCGAT AATGGGATCG GTTTTGAATC TGACCATGCA GAAAAGATAT TCGATGTATT CCAGCGTTTG CATACCCTGC CGGATATTGC CGGTACGGGT ATCGGACTGG CCATCTGTAA AAAGATCGTG CTGAATCATC GCGGGCAAAT TAAGGCATAT GGCATACCGG GTATCGGCGC TACCTTCGAT ATCTTCATTC CGATTGAATA G
|
Protein sequence | MEQGFNTAMA NTLLGEAGIS SAGLLEQLPV AAYICDVNGG IICCNARAVK LWGRTPSAGE TIFHDSTVIA AVLEEGLPLE DWQSTISHAD DTSVIVRGSI TPLKDGDGSV IGLIHCFEKV AVTIVPGTEI RAGHLAELNE QLQQSEERYY KMIEEVEDYA ILSMDRSGII QNWNKGAEKI KGYHESEIVG RHFSVFYLPE DRKRQLPEQL ISEAMKTGKA AHEGWRMRKD GTRFWGSIVI TALHDADRQV IGFSKVTRDL TERKLAEDRI RQYASDLEFQ NRELEQFAYA AAHDMKEPLR KVQFYNNYIN DNAADALPEK AREYLHRSIN AASRMQGLID DLLMYSQASA FSKEPEDVDL TTIVNEVLEA HQPTIDKLKA VVHLDPLPVM RVIPFQFSQL FDNLISNALK YHHPERHPHI NITITKTQLP AEDILLNNAE LNGYKLSVSD NGIGFESDHA EKIFDVFQRL HTLPDIAGTG IGLAICKKIV LNHRGQIKAY GIPGIGATFD IFIPIE
|
| |