Gene Cpin_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1365 
Symbol 
ID8357483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1631914 
End bp1633038 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content41% 
IMG OID644963522 
Producthypothetical protein 
Protein accessionYP_003121063 
Protein GI256420410 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAG AAGAAAAAGT GGAGACAGCA GAAAAGACAG TATCAATTCA AGCACCAACA 
GCAAATGAAA ATCCCGATAA ACAACTTTTT AATAAAAGAA TGATCCTTAA AGGGGCTATG
TGGCTTGGTT TGTTAACCAT CGCATCAGTC GCTGTCGTGT TTTTTTATTC ACATACTGGT
GATACCATCA TAGCGCTAAG CAGCATTAAA CTTAAATATA TACTGATATG CTTCGGTATG
GTTTTTATCG ACCTGATGCT GGGCAGCTGG CGTAACCATA TTTTTATACA AAAATTTAAA
CCGGGCGTGT CACACTGGGT AAGTTTTAAG GCCAATGTTG CTAATATGTT TATGGGAGCA
ATAACGCCAT TCCATAGTGG TGCAGGCCCA GCTCAGTTAT ATGTATACAA CCGCCATGGC
GTAAAAGTAC TGGACGGATT TATTGTCAGC CTGATTAACA TGGGTGCAAC GCTGCTCTTT
ATGCCATTGG CCGGCTTATT AGCTATATGG GTAATGAATA ACCAACTGGA AAGCGGCCTT
ATAAAGATTT TACTCAAATA TGGCTTCTCG GTATTTTTCA CTTTTGGGGT TGTTTTCATG
CTTGCTTTCT GGAAGCCGCT ATGGATCGGA GCTGCTTTGA TCAAAATCGC TGCGCTGTGT
AGCCGGATCT GGCCTGCGAA GAAAGAGCGG ATAACGAAAT GGGCTAACAC GTCTTATGCT
AACATTCTTC ATTACCAGCA AATTTGTAAA AAATTATTAC AACATCATCC CTTGCTGTTT
CCTCTGAGTC TGCTGATGAC GACGCTGCTT TACCTGAATA AATATTGTAT GCAGTATGTG
ATATTATTGG GCCTGGGCAT TCATGCCGAT ATGTTACAGG TGATAAGCAT TCAGATCCTC
ATCCAGTTTA TGATCTATTT CGCACCAAGC CCTGGTGGGA GTGGATTTGC CGAAGCCAGC
ATTGCTGTCT TGTTTTCAAG GATTGTCCCT ACATCCATAT TGCCGGTCTT TACATTATTA
CAGCGATCTT TTCTGCTCTT TTTTCCGGCG CTGATAGGCG CATTTGTAAT ATTAAATCTA
CTTAAAACCC ATACCATATC GGTGCAAGAC GACAATCATG GATAA
 
Protein sequence
MLLEEKVETA EKTVSIQAPT ANENPDKQLF NKRMILKGAM WLGLLTIASV AVVFFYSHTG 
DTIIALSSIK LKYILICFGM VFIDLMLGSW RNHIFIQKFK PGVSHWVSFK ANVANMFMGA
ITPFHSGAGP AQLYVYNRHG VKVLDGFIVS LINMGATLLF MPLAGLLAIW VMNNQLESGL
IKILLKYGFS VFFTFGVVFM LAFWKPLWIG AALIKIAALC SRIWPAKKER ITKWANTSYA
NILHYQQICK KLLQHHPLLF PLSLLMTTLL YLNKYCMQYV ILLGLGIHAD MLQVISIQIL
IQFMIYFAPS PGGSGFAEAS IAVLFSRIVP TSILPVFTLL QRSFLLFFPA LIGAFVILNL
LKTHTISVQD DNHG