Gene Cpin_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1349 
Symbol 
ID8357467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1612862 
End bp1613638 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID644963507 
Producthypothetical protein 
Protein accessionYP_003121048 
Protein GI256420395 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TCAAATCAAA AACCATTGTA TTCATCACCG GAGCATACGT TAGTAACCGC 
TGTTGGGACG ACTGGAACCG CTATTTTCAG CGTCAGGGCT ATACTACAGT CGCTCCCTCC
TGGCCACAGA AAGAAGGAGA TCCCGCTGCT CTTCGTGGTC GTCAGCCCAA TATGGCACTG
GCAGCAGTCG ATCTGCCGCA GGTACTGGAC AGCTATATCA GCGCTATCAA AAAGTTGCCG
GAAAAGCCTA TCCTGATCGG ACATTCATTT GGCGGAATGA TAACCCAGGT GCTCCTGAAC
AAAGGATACG GCGTTGCCGG AGTGGCTATA CACGCCGTGC CGCCTAAAGG AGTTTTCCCT
TACGAAATCA ATTTCCTCAA ATCCAATACG GCTGCTTTAG GTTTCTTTTC TACGGTCAAT
ACCACTTACC TGATGCCGTT CAAAACATGG CAGTTCGCTT TCACCAATGG TATGTCACTG
GCTGAGCAGC AAACCAGCTA CGAGCAGCTG ACTATTCCTG AATCCAGAAG GGCAATCAGG
GGCGCTTTGA GCAATGAAGC GAAGGTGGAC TTTAAAAAGC CACAGGGACC TTTACTGATA
CTGGCAGGGT CGGAAGACCA GTGTATCCCG CCAGGCTTAT GCGAGCGGGT ATATGCACGT
TACAATAACT CGTCTGTAGT CGATTTTAAG CTGAAAAAGC GTAACCACTA TGTATTGGGG
CTGCCCACCT GGAAAGAAGA TGCGGACGAG ATCCTGCAAT GGATAACACA GCATTGA
 
Protein sequence
MEKIKSKTIV FITGAYVSNR CWDDWNRYFQ RQGYTTVAPS WPQKEGDPAA LRGRQPNMAL 
AAVDLPQVLD SYISAIKKLP EKPILIGHSF GGMITQVLLN KGYGVAGVAI HAVPPKGVFP
YEINFLKSNT AALGFFSTVN TTYLMPFKTW QFAFTNGMSL AEQQTSYEQL TIPESRRAIR
GALSNEAKVD FKKPQGPLLI LAGSEDQCIP PGLCERVYAR YNNSSVVDFK LKKRNHYVLG
LPTWKEDADE ILQWITQH