Gene Cpin_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1339 
Symbol 
ID8357457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1597890 
End bp1598918 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content43% 
IMG OID644963497 
ProductKWG repeat protein 
Protein accessionYP_003121038 
Protein GI256420385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.806638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATAG TGAGTATAGT AACGTTGTTG CTGACGATTG GAGTAAGTGA CCTGTATGCA 
CAAAGTGATT CCCTGTACCT GATCAGCGAC CGGGGAAAAT TCGGATATGT CAATAAAGAG
AAAACAATAG TGATTACGCC GCGATTTTTC GCGGCGTATC CCTTTAAGGA AGGTCTTGCT
CCGGTGAGAG AAGCCGGGTT TTATGGCTAT ATCGATACCA GCGGACATTA TGTAATACAA
CCTCGTTTTG AACAGGCATT ACCATTTCAT GACGGACTGG CGAGAGTATA TGAAAATGAC
AAGGTCTTTT ATATTGACAA AAGCGGTTGT AAAGTATCTG ATGAGGCAAA AGAGCTGGAA
GCGATCCATA CATCCGAAAG ACTGATAGTA AAAATTCCAC CATTCGTTTA CTTCTATATG
GATTCATTGG GTCATCTCAC ACGGAATGAA CCACATATGA CGCTATATAA CAAAAACATA
GATTACCTGG GGGATATTAG TTATTTGATT CAAGAAGGAA CGTCTTCTGA GATAAGGCAG
AACGAGTGGA AAAATTATCC GAATGCTGTC TCTCCTTTTG ATACACTGTT TCCTACAGAT
ACATTGCGTA TTGTAGCTGT TCCGGCAGCC AGGACTGTAG TCGAGGACAG ATATAACGGA
TATAAGGTGT TTGTGGTCAA TGCAGGACAG AAAGCGGCCA CATTGTTAAC GACACACGGC
CGTCTTCATA TCTGGCTGGA AGCACTGACT GGCAATAATG AATGGAGAAA CCTGGAAATT
CCCCCCCGTA GTGACCATCT ATTTTCATCG AATTTTTCGC GGCGGGTTTC CCTATCTGCA
CAAAGGTACT GGGAGCTGCA TTGTCCGGTG TATGAAGGTG TATTCAAGAC GAGAATGCGA
TATGCGATGT ACTATTTCCC AAGACCAGAT AAAATAGAAC CGGCTGTCAT TATCTACAGT
AATGAGTTTG AGGGAAGTAT TAATCCGGGT CAGACGTCTA TTCCCATAGA TGAGCCTCAA
CTACCATAG
 
Protein sequence
MRIVSIVTLL LTIGVSDLYA QSDSLYLISD RGKFGYVNKE KTIVITPRFF AAYPFKEGLA 
PVREAGFYGY IDTSGHYVIQ PRFEQALPFH DGLARVYEND KVFYIDKSGC KVSDEAKELE
AIHTSERLIV KIPPFVYFYM DSLGHLTRNE PHMTLYNKNI DYLGDISYLI QEGTSSEIRQ
NEWKNYPNAV SPFDTLFPTD TLRIVAVPAA RTVVEDRYNG YKVFVVNAGQ KAATLLTTHG
RLHIWLEALT GNNEWRNLEI PPRSDHLFSS NFSRRVSLSA QRYWELHCPV YEGVFKTRMR
YAMYYFPRPD KIEPAVIIYS NEFEGSINPG QTSIPIDEPQ LP