Gene Cpin_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1338 
Symbol 
ID8357456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1597086 
End bp1597511 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID644963496 
Producthypothetical protein 
Protein accessionYP_003121037 
Protein GI256420384 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.415762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAA ATGAAGTACA GGATAAACTG ATTGAGGATG TAATGCACCT CGAAGATGAA 
GAAAGCCGCC AGCAATACAT AGATAATATT GCAAAATCAT TGCCTTTGAT GGAAGACAAG
TATAAACATG AACACTACCA GGTACAGGGC TGGATCTCCG ATATTTGGGT CCGTGCTGTC
TATATCAAGG AAAAAGTATG GTTCACAGCA GCCAGCAGCG ATAAAGCGAC GAATGGTCTG
CTGGCCATGT TTTCAAGGGT TCTGTCCGGC AATCATCCAA AAGATATCGC TGATGCGGAT
ATCTATTTCA TGAACGAGAT CTCCGGTCTT TTTCAGCCGT TCCTGACGCT GCAATGGCCG
TTGATATTAA GGAAAATGAA ATCACAGGCA GTAGCGTACC AGATACAGTT ATTGCAAGCC
CTGTAA
 
Protein sequence
MSINEVQDKL IEDVMHLEDE ESRQQYIDNI AKSLPLMEDK YKHEHYQVQG WISDIWVRAV 
YIKEKVWFTA ASSDKATNGL LAMFSRVLSG NHPKDIADAD IYFMNEISGL FQPFLTLQWP
LILRKMKSQA VAYQIQLLQA L