Gene Cpin_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1328 
Symbol 
ID8357446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1586212 
End bp1586652 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content46% 
IMG OID644963486 
Productribosomal protein S16 
Protein accessionYP_003121027 
Protein GI256420374 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.519364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAA AAATCAGACT GCAACGTCAT GGCGCTAAGA AGAGACCTTT TTATTTTATA 
GTAGTAGCCG ATGCTCGCGC GCCAAGAGAT GGTAAATTTA TCCAGAAAAT CGGTACTTAC
AATCCACTGA CTGTGCCTGC TTCTATCAAC ATCGATACAG ACAAAGCACT GCGTTGGTTA
CAGAAAGGTG CTCAGCCTAC AGATACAGTA AGAAGAATCC TGTCTTTCAA AGGTGTTCTC
TACCTGAAAC ACTTACTGAG AGGTGTGAAA CTGGGTCTGT TCGATGAGCC TACAGCTTTC
ACCAAATTCG AACAATGGCA GGCTGAACAC GAGCAGAAAG TTGCTGCACG TCGTGACAGT
CACAAGAAAG CAAGAGTTGC CGCTCCAATC GTGAGAAGAG TAGAAGATAC TCCAGCTCAG
CCAGAAGGTG GCGAAGCATA A
 
Protein sequence
MPVKIRLQRH GAKKRPFYFI VVADARAPRD GKFIQKIGTY NPLTVPASIN IDTDKALRWL 
QKGAQPTDTV RRILSFKGVL YLKHLLRGVK LGLFDEPTAF TKFEQWQAEH EQKVAARRDS
HKKARVAAPI VRRVEDTPAQ PEGGEA