| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1323 |
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| Symbol | |
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| ID | 8357441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1580672 |
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| End bp | 1582108 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963481 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_003121022 |
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| Protein GI | 256420369 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.976143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC TGGATAAACT GCTCATCAAA ACATTCATGG GGCCATTCGT GGCTACTTTC
TTTGTAACAC TATTCGTGTT GGTGATGCAG TTTCTGTGGA AATATATCGA TGACCTCGTA
GGTAAAGGAC TGGACACACC TGTCATTATC GAGCTGATCA CCTATACCAG CGCCAACCTG
GTATCTCTTG CCCTGCCGCT GGCTGTACTG CTTTCCTCTA TCATGACCTT CGGTAACCTG
GGAGAAAGTT TTGAACTGGT CGCGCTGAAG TCCTCCGGGA TTTCGCTGAC ACGCTTCATG
CGTCCCTTAC TGGCCGTGTG TACGATGATC GCAATACTGG CATTCCTGTT TAACAACTAT
GCGATGCCTG TTGCAAACCT GCGTGCAAAG TCCCTGCTGT ATGATATTAC GAATTCAAAA
CCCGCCTTCA ACATCAAAGC CGGCGTTTTC TACACAGATA TTCCTGACTA CACCATCAAG
GTAGCAGAAA AAGAAAAAGA TAATAAAACC ATCCACCAGG TAATGATCAT CGATCATACT
CCCGGTGGCG GCGACAAGGT AATCCTCGCT GAAAAAGGAA CCATGCTGCT TTCTGCTGAC
AAACGCTTTC TGTATTTCGT ACTGGAAAAA GGATGGCGTT ACGAAGAACG TAACAACCGT
AGCTCCACCA CTCCCGGTGA ACTGATCCGC CTGGGATTCC GCGAATACAA AAAAGCATTT
GACCTCAGCT CTTTCGCTTT CAGCCGACTG GATATGGGAC TCTTTGCCTC TAACCAGCAG
ATGCTGAACG TCAGACAGCT CGATAAAGCG ATCGACTCAC TGTACAAACA GGAGCAACTG
TTCAGTCGTA CAGTAAATGC ATATGTCACC ACCCGCTATG CCTTCTACAA ATGGCAGGAT
ACAGGATGGC TCGCAAAAGC CCCTGCACTG GGTGTGACCA ACTTTAAAGA TATCATACCT
GAAAAATCAC TCAGATATAC ACTGGAAAGA ACAGAACAGA ACATCCGCGA CGGACAGAAT
AACCTAGAAG GACCTGCCCG TGAGTTCGGC GATAAACATG GTACCCTGCT GCTGCACAAA
GTAGAATGGC AGCGTAAATT CACCCTGGCT TTCTCCTGTA TCGTAATGTT CCTGATCGGA
GCTCCCCTGG GCTCGATTAT CAGAAAAGGC GGTCTTGGTA CACCACTGAT CTTTGCCGTT
GTGTTCTTTG TGATCTTTAA TATATTTTTC ATGGTTGGGG AGAAGATGGC CAGAAAAGAC
GTAATGGCCA CCTGGAGTGG AATGTGGCTC TCCAACATCG TCCTTATACC TATTGCAATG
TTCCTGATCT ATAAAGCGCT GAACGATTCA AATCTGTTCA ACAAAGAGTT TTATTTCAGG
AGCTTCAATA ATATCAAAAA GCTCTTTAAA AAAAACAGTC CAAAACCTAC AACTTGA
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| Protein sequence | MKKLDKLLIK TFMGPFVATF FVTLFVLVMQ FLWKYIDDLV GKGLDTPVII ELITYTSANL
VSLALPLAVL LSSIMTFGNL GESFELVALK SSGISLTRFM RPLLAVCTMI AILAFLFNNY
AMPVANLRAK SLLYDITNSK PAFNIKAGVF YTDIPDYTIK VAEKEKDNKT IHQVMIIDHT
PGGGDKVILA EKGTMLLSAD KRFLYFVLEK GWRYEERNNR SSTTPGELIR LGFREYKKAF
DLSSFAFSRL DMGLFASNQQ MLNVRQLDKA IDSLYKQEQL FSRTVNAYVT TRYAFYKWQD
TGWLAKAPAL GVTNFKDIIP EKSLRYTLER TEQNIRDGQN NLEGPAREFG DKHGTLLLHK
VEWQRKFTLA FSCIVMFLIG APLGSIIRKG GLGTPLIFAV VFFVIFNIFF MVGEKMARKD
VMATWSGMWL SNIVLIPIAM FLIYKALNDS NLFNKEFYFR SFNNIKKLFK KNSPKPTT
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