| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1321 |
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| Symbol | |
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| ID | 8357439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1578194 |
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| End bp | 1579819 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963479 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_003121020 |
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| Protein GI | 256420367 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACC TGTTGATTGC CATTGTCGCT GCTGCTCTTT TCGTACCCTT CCTGGGCGCT
GTGCACTTGT TTGACTGGGA CGAGATCAAT TTTGCAGAAG CTGCAAGGGA GATGATTGTA
AGCCATGATT ATTCAAGAGT ACAGATCGAT TTTAAGCCCT TCTGGGAAAA GCCTCCCCTG
TTCATATGGC TGCAGGCTAT CAGTATGCAG CTCTTTGGGG TAAATGAGTT TGCAGCTCGT
TTTCCCAATG CCATGATCGG TATTGCGACC CTGGTGACCC TGTTCGGCAT TGGTAAGAAA
CTGGCAGACG AGAAATTAGG GCTCTGGTGG GCACTGGCTT ATGCCGGTTC ATGGCTGCCA
CACTTCTATT TCAAATCAGG TATTATTGAC CCGACTTTCA ATTTCTTTAT ATTTCTTGCG
ATCTATTGCG CTTATCGTAC CGCATTCAGT GGTAAACCTT CCAGGTTGGC TATCCTGAGT
GGTATATTCC TTGGATTGGC CGTACTTACC AAAGGGCCGG TAGCTATCCT GGTGAGTATA
CTGACCTTTG TCTTCTACTG GCTGTATAAA AAAGGGAAAA CGGGTATTGG TCTGGCGCAA
TTGGGTATCA TTATACTGGC ATCCGTGTTG ACCACCGCGC TCTGGTTCGG TTATGAGATC
GTCGCACATG GTTTCTGGTT TGTACAGGAA TTCATTACCT ATCAGATAAG ACTCTTTACA
ACAAAAGACG CAGGCCATGG CGGTTCGTTC TTCTATCACT GGATCGTGTT GCTGATCGGA
TGTTTCCCTG CCAGTCTGTT ACTGTTCACC TATATCAGAG GACGTAAGGG GAAATCTATC
TATACCGGGT CAAATTCAGC GGAGGTAAAA GACTTCAAAA TATGGATGTG GGTATTGTTT
TGGGTCGTAC TGATCCTGTT TTCCATCGTG GAAACCAAGA TCGTTCACTA CTCTTCACTG
TGTTATTTCC CGCTTAGCTT CCTTGCTGCC TGGCAACTGT ATCGGATTTC CGAAAACAAA
CTGCAACTAC ATGCCTGGAA TATTGTGCTA ATGATGCTGA TAGGTCTGTC AATCGGTCTG
GCCATTACCT TATTACCATT GGCAGGCGTA TATAAAGATG TGATCATTCC ACATATACAC
GATCGTTTTG CACAGGCCAA TCTGCAGGCA CAGGTGCCCT GGTCAGTATG GGAAGCCGCT
TACGGCGCCG GCTATATGTT GCTGATCATC ATTGGTGCAG TACTCCTGTT CCAGAAAAAA
GTACAGGCAG GCCTGCTGTG TATTTTCTTT AGCACCATTC TGGCCATACA AATCACGATT
GTCCATTTTA CACCTAAAAT AGAGCGTTAC TCACAGGGTG TTGCGATCGA CTTTTTCAAA
ACATTTGAAG GGAAGGATGA TTATGTGCAG GTACTAATGT ATCATAGCTA TGCACACCTG
TTCTATACAA AGAAGCTCCC ACCGGTTAAT CAGAACTACT ATAATACCGA CTGGCTGCTG
AGCGGGAAGG TAGATAAACC TACCTGGTTT GTATGCAGAA CGACGGATAG TGCGCCATTC
AGAACAGATC CGGATCTGGA GATTGTGGAA GAAAGGAACG GATTTGTATT CTTTAAAAGA
AAATAA
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| Protein sequence | MKYLLIAIVA AALFVPFLGA VHLFDWDEIN FAEAAREMIV SHDYSRVQID FKPFWEKPPL
FIWLQAISMQ LFGVNEFAAR FPNAMIGIAT LVTLFGIGKK LADEKLGLWW ALAYAGSWLP
HFYFKSGIID PTFNFFIFLA IYCAYRTAFS GKPSRLAILS GIFLGLAVLT KGPVAILVSI
LTFVFYWLYK KGKTGIGLAQ LGIIILASVL TTALWFGYEI VAHGFWFVQE FITYQIRLFT
TKDAGHGGSF FYHWIVLLIG CFPASLLLFT YIRGRKGKSI YTGSNSAEVK DFKIWMWVLF
WVVLILFSIV ETKIVHYSSL CYFPLSFLAA WQLYRISENK LQLHAWNIVL MMLIGLSIGL
AITLLPLAGV YKDVIIPHIH DRFAQANLQA QVPWSVWEAA YGAGYMLLII IGAVLLFQKK
VQAGLLCIFF STILAIQITI VHFTPKIERY SQGVAIDFFK TFEGKDDYVQ VLMYHSYAHL
FYTKKLPPVN QNYYNTDWLL SGKVDKPTWF VCRTTDSAPF RTDPDLEIVE ERNGFVFFKR
K
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