Gene Cpin_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1314 
Symbol 
ID8357432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1571343 
End bp1571759 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content43% 
IMG OID644963472 
Productresponse regulator receiver protein 
Protein accessionYP_003121013 
Protein GI256420360 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.755689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGA TTCCTGATTT ACGTGTTATA CTGATCGACG ATAACGAAGT GGATCTGCTG 
CTGCATGAAC GTTTGATAAC CTTGCAGCAG ATCAGCAGGA CAGTGCTTGC TTTTAACAAC
GCAAACAAGG CGCTCGAATT CCTGTCTTCC AATATTTCGC TGCCACGCAT CCCTCCCACT
GTGTTGCTGC TTGACATACA GATGCCGGAA ATGGATGGTT TTGAATTCCT GGACGCATTT
TATAGTTATC CTGCCAAAAT CAAGTCACAA TGCCATGTGA TCATGGTATC ATCTTCTCTT
GATTATGGTG ACCTCAGCCG TACCTACGCC AATCCGATGG TCTTTAAACT GCTGAAAAAA
CCTTTACTGG CAAGCGAATT GAAAAATGCA ATCGTGGATA TTTTCAGAGA TCAGTAA
 
Protein sequence
MISIPDLRVI LIDDNEVDLL LHERLITLQQ ISRTVLAFNN ANKALEFLSS NISLPRIPPT 
VLLLDIQMPE MDGFEFLDAF YSYPAKIKSQ CHVIMVSSSL DYGDLSRTYA NPMVFKLLKK
PLLASELKNA IVDIFRDQ