| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1307 |
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| Symbol | |
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| ID | 8357424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1561524 |
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| End bp | 1562861 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963464 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003121006 |
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| Protein GI | 256420353 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.678061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAA AAACAGCGCA CACAGAAAAG AATAAACTGG GTTTATTAAC CAGCACCTCC
CTGATTGTCG GGAATATGAT CGGCGCTGGT ATATTCCTGG CGCCAGCCGC CTTATCTTCC
TTTGGCAGTG TCAGTCTGCT GGGATGGGTG ATTTCTGCAA CAGGCTGTTT TTTCCTGGTA
AAGGTCTTTA GTAATCTGAG CCGGATCGTC CCTAATGTTA CCGGCGGACC ATACGCTTAT
ACCCGCCGGG GCTTCGGTGA TTATATGGGT TTTTCGATTG CCTGGGGGTA CTACATTGCG
GTAGCCTGTG CAAATGCGGC TATTACGGTA GGCTTTGTGA GCGCACTGAG TACCTTTATT
CCTTTGTTAT CTACCAGCAC ACTGGCGGCG GCATCAACAG GACTGGCTTC CATCTGGCTG
CTCACCTGGA TCAACAATGC CGGCGTAAGA GTATCGGGAC GGGTACAATT GATCACGACC
ATCCTGAAAC TGATTCCGCT GATCGCGGTT GCTTTCTGCG GATTATTCTT CATCCGGTTT
GACAACTTCC CTCCTTTCAA TAACAGCAAT ATGTCATTGT TTGAAGTCAT TTCACAGACG
GTGACCTTCA CCATGTTTGC ATTTGTAGGG ATAGAGTCGG CCACTGTACC GGCAGATAAA
GTAGCCGATC CACAGCGGAC CATCCCCCGT GCTACAATGC TTGGACTGAT CATCGTTACA
ATTGTATATG TATTGGGAAC AGTGAGTGTA ATGGGTATCA TTCCACCCGC TCAGTTACAA
AATAGTCTGA CACCCTTCGC AGATGCAGCT GTCATCATGT GGGGCCCTCA TGCCCGTTTC
CTGGTGAGCG CCGGTGTAGC GATTGCGGCA TTTGGCGCCC TGAATGGCTG GATCCTGATC
CAGGGACAGT TACCTTATGC GATCGCAAAA GACAAGCTCT TTCCGCGTGT ATTTGGCAAA
GAGAATAAGA AAGGTGTACC TTATGTAGGT ATGTTTTTCA GCAGTATATT GATCTCCATA
TTTATGATCA TGAACTACAA CAAGGGACTG GTAGACCAGT TTAAATTCCT CGTATTACTG
TCTACGCTCT CTGTACTGAT ACCTTACCTG TTTTCAACAG CCTCCTACTT TGTATTACGT
ACGAGCAAAC AACTGACGAA AAGCGAATGG GCGCAATGCA TCCTACTCTT CACTATTTCC
TTCGGATATG TATTCTGGGC AATTGCCAGC GCCGGACAAA AAACCATCTT CTATGGATTC
CTTTTACAGA TGACAGGCAT TCCTTTATAT CTCTGGATGA AGGCAAAAAA TGAAAATACC
GCCCAGGGAG ATCTATAA
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| Protein sequence | MPEKTAHTEK NKLGLLTSTS LIVGNMIGAG IFLAPAALSS FGSVSLLGWV ISATGCFFLV
KVFSNLSRIV PNVTGGPYAY TRRGFGDYMG FSIAWGYYIA VACANAAITV GFVSALSTFI
PLLSTSTLAA ASTGLASIWL LTWINNAGVR VSGRVQLITT ILKLIPLIAV AFCGLFFIRF
DNFPPFNNSN MSLFEVISQT VTFTMFAFVG IESATVPADK VADPQRTIPR ATMLGLIIVT
IVYVLGTVSV MGIIPPAQLQ NSLTPFADAA VIMWGPHARF LVSAGVAIAA FGALNGWILI
QGQLPYAIAK DKLFPRVFGK ENKKGVPYVG MFFSSILISI FMIMNYNKGL VDQFKFLVLL
STLSVLIPYL FSTASYFVLR TSKQLTKSEW AQCILLFTIS FGYVFWAIAS AGQKTIFYGF
LLQMTGIPLY LWMKAKNENT AQGDL
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