Gene Cpin_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1303 
Symbol 
ID8357420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1554479 
End bp1555114 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID644963460 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003121002 
Protein GI256420349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGA TAAAAATGGC CCGGAAGTCC ACTGCCGTTG ATATGACTGC CATGTGTGAT 
GTCGTTTTTT TGTTGCTTAA CTTCTTTATT ATGACCACTA GTTTCAAGCC GGATGAGCCA
GTGGCAATTG TCACCCCGTG TTCTATCAAT ACAAAACTCC TCCCGGATTC TGATGTCATA
TTGGTAAGTA TAGATAAGGC CGGACGTGTG TTTTTTGAAA TAGATGGACA ACCAAAAAGA
AAGCAATTAA TAGAAGATAT TAATACACAG TTTAAGCTGG GCTTGTCTGA AAAGGAGATT
AATGCCTACA TATTGGGGGC AAGTGTGGGC ACTGATCTGC ATCACCTGAA AGAATACCTT
GGTCTGAAAA CGTCCGACAG ACGTAAATAT GCCGGTGAGA CCGGTATCCC TGTTGATACT
GCGAATAATG AACTGGCTGT ATGGATAGAA TATGCGCAAT CTGCTCAGGG AGCGGGACTT
AAAGCATTGA AGTATTGCGT CAAGGCAGAT AATGCAACAC CTTATCCTAA GGTGAAACGT
GTAATGGAAA CTTTTAAGGA GAAGAATATT CAGCACCTGA ATCTGGTGAC CAGTCTGGAG
GCAGCTCCAG AAGGAACTGC TGCTGCGGAG GATTAG
 
Protein sequence
MPKIKMARKS TAVDMTAMCD VVFLLLNFFI MTTSFKPDEP VAIVTPCSIN TKLLPDSDVI 
LVSIDKAGRV FFEIDGQPKR KQLIEDINTQ FKLGLSEKEI NAYILGASVG TDLHHLKEYL
GLKTSDRRKY AGETGIPVDT ANNELAVWIE YAQSAQGAGL KALKYCVKAD NATPYPKVKR
VMETFKEKNI QHLNLVTSLE AAPEGTAAAE D