Gene Cpin_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1296 
Symbol 
ID8357413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1547282 
End bp1548199 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content51% 
IMG OID644963453 
ProductArginase/agmatinase/formiminoglutamase 
Protein accessionYP_003120995 
Protein GI256420342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.925134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATT TCATGATCAT TGAGGCCCCA TCCAACCTGG GTTTGAAAGA ACCGCGTCCA 
GGTGTGGAAC CCGGTGTACG TTTTCTTCCG GAAGCACTAC GCCGGAACGG CTTTTCCAGA
GAAGCCGGCA TCACTCAAGT TATCAATGTT CCTGCACCTC CATATACGAT GGATATAGAC
CCGGACAGCC AGATCCGGAA TGCCGATGCC ATTTGTGCTT ATAGTCAGCT ACTGGCAGAA
AGGGTTTGTG AGGCCGTTCA GAAGGATATT ATCCCGATCG TTATAGGCGG CGACTGTAGC
ATCCTGATAG GTACTGCCCT GGGACTGAAG AGTACCGGTG GCAGCTACGG ATTGTTTTCT
ATGGATGGAC ACCATGATTA TATGTTACCC TTCCATTCCG GCACTGCCGG GGCGGCAGGT
ATGGGCTTAG CGATCGTATC CGGCAACGGA CATCCTAAAT TGTGCGATAT CCACTCTTTG
CGACCATATA TAATGGAGCA GCACATCTAT GCTTATGGGA ACCGTGAGCT GGATGAGGAA
TATGTACAGA TTATCCGGGA CAGCCAGGTC CATTATTATG ACCTGCCGTC TATCCGGGCG
AGAGGGATAC AAGCCATAAC GACGGAGTTC CTGACGATGA TGGGGCATTC GGGACTGGAC
GGATTCTGGA TCCACCTGGA TGTAGATGTA CTGGACAATG ATGTCATGCC TTGTGTGGAC
AGTCCGGAAG AGGGTGGCCT CTCCTACCTG GAACTGGAAG AAACCCTGAT ACCATTAGTT
AACTCCGGAT ATTTCAAGGG GATGCATATT ACGATCCTTG ATCCTACACT GGACCCTGAC
AACCGATATA CACGGACTTT TTCCGAGCGG CTGGCCCATC TGTTGAGACC CGTTGTGGAA
GGACTGACAG TGAGTTAA
 
Protein sequence
MRNFMIIEAP SNLGLKEPRP GVEPGVRFLP EALRRNGFSR EAGITQVINV PAPPYTMDID 
PDSQIRNADA ICAYSQLLAE RVCEAVQKDI IPIVIGGDCS ILIGTALGLK STGGSYGLFS
MDGHHDYMLP FHSGTAGAAG MGLAIVSGNG HPKLCDIHSL RPYIMEQHIY AYGNRELDEE
YVQIIRDSQV HYYDLPSIRA RGIQAITTEF LTMMGHSGLD GFWIHLDVDV LDNDVMPCVD
SPEEGGLSYL ELEETLIPLV NSGYFKGMHI TILDPTLDPD NRYTRTFSER LAHLLRPVVE
GLTVS