| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1207 |
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| Symbol | |
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| ID | 8357323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1436603 |
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| End bp | 1439461 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963363 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003120906 |
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| Protein GI | 256420253 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000143233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCCGG AATGGTTTAC TTTCAGTATT TTTACATCTA TTATGGCTAC TAAAGTGAAG
AAAACGGAAA CAATAACTGA AGCTCAGTCA GTTAGTACGC AAGATCAGAT TTTCATTAAG
GGCGCACGCG TTCACAACCT CAAAAATGTT AGCGTAGGCA TTCCAAGAAG CAAGCTGGTA
GTGGTAACCG GAGTCTCCGG TTCAGGCAAG TCTTCACTGA CCATGGACAC ATTGTATGCT
GAAGGCCAGC GCCGTTATGC GGAGAGCCTC AGCGCTTATG CCCGTCAGTT CCTTATGCGC
ATGAACAAAC CTGATGTGGA TTACATCAAG GGGATTTGTC CTGCCATTGC CATCGAGCAG
AAAGTGATCA CCCGTACACC ACGGTCTACC GTGGGCTCTA TGACGGAGAT ATACGATTAC
CTCCGCCTCT TTTTCGCCCG TATCGGCAAA ACATATTCTC CTGTCTCCGG TCAGCTCGTA
AAGAAACACG AGGTGAGTGA TGTGGTTGAT TATATCAAAA AATTGCCTGC CGGGTCCAAG
ATACAATTGC TGGTTACCTT CCGCCGTCAC GAAAAACGCG ACGTGAAAGA AGAATTGCAG
ATCCTGATGC AGAAAGGTTT TTCCCGTCTG TATGTAAAGG AAAAAGGCAA GGGCGCTCTG
CTGCGTATCG AAGAATTGCT GGATGAAAAG AAACCGGCGC TGCCCAAGGA GGCTTACCTG
CTGGTGGATC GACTCGTGGC AAAGGAATTT GAAGAGGATG ACCTGCACCG CATCGGCGAT
AGTGTGCAAA CCGCTTTTTA TGAAAGCGAG GGCGACTGTC TCGTAGAGGT AAATGGTGAA
GAGATGAAAC ACTTCTCCAA CCGTTTTGAA CTCGATGGAA TGCAGTTTGA AGAGCCGGTA
CCCAACCTGT TCTCCTTCAA CAACCCTTAC GGTGCTTGTC CTGTATGTGA AGGTTTCGGC
CAGGTACTCG GTATTGACGC CGATCTGGTA ATACCTGACA AACGCCTGAG TGTATATGAA
AACGCCATCG CCCCCTGGAG AGGTGAGAAG ATGGGCGAAT ACAAAGAAGC ACTGATAAAA
GCCTCCCGTA AGTTCAATTT CCCGATCCAC AAACCAATCG TTGATCTTAC AGATGAACAA
GTTCAGTTGC TCTGGACGGG GAACGAGCAT TTCTACGGAC TGAACGAGTT TTTCAAAATG
GTGGAGCAGA ACCTGTACAA AGTACAGTAC CGTGTGCTGC AATCCCGCTA CCGTGGCCGG
ACTGGTTGTC CGGAGTGCGG AGGTGGCCGC CTGAGAAAAG AAGCTTTATA CATTAAAGTG
GCTGGCGTTA ATATCGCACA ACTGGTAGAT ATGCCGGTAA GCAACCTCTA CGAATGGTTT
CAGCAGCTGC AACTGTCAGA ATATGATCAG CAGGTAGCAA AGCGAATCCT GGTAGAAATT
GATCACCGGC TGAAGACATT ACTGGATGTA GGTCTGGGTT ATCTCACCCT GAACCGTGTG
GCCAACACAT TAAGTGGTGG GGAAAGTCAG CGTATACAGC TGACCCGCTC GCTGGGTAGT
AATCTGACCA ATTCCATGTA CATACTCGAT GAACCAAGTA TCGGTCTGCA CGCCCGCGAT
ACCCATCGTC TCATTGGTGT ACTGAAAGAA CTACGTGACC TGGGTAACAC CGTGGTCGTA
GTAGAGCACG ATGAAATGAT GATGGAAGAA GCCGACTATA TCATCGATAT GGGACCATTG
GCCAGTCACC TGGGTGGTGA GGTGATCTTC GCCGGTAATT ACCAGGAGAT CCTGAAAGAC
AGTAAAAGTC TGACAGGTAA ATATCTCAGC GGCCAATTAA GCATTGAGCC GCCGATCAAG
CTCCGTAAAT GGAAAAAAGC GATTTCCCTG GAAGGATGCC GTCAACATAA CCTGAAAAAT
ATCGATGTCG ATTTCCCTTT ACAGGTACTG ACTGTTGTGA GCGGTGTGAG CGGATCCGGT
AAGACCACAC TGGTAAAACA GATCCTTTAT CCGGCACTCA TGAAACTGAA GGGTGAATTT
GCAGATCGCG TAGGGCAGCA CCGTGCACTG AAAGGCGCTG TAGATGATAT CACACAGATC
GAAATGGTTG ACCAGAATCC GATCGGAAAA TCATCCCGTT CCAACCCGGT TACTTATATC
AAAGCATATG ACGAAATCCG TGACCTGTAT GCAAAGCAGC AGCTGAGCAA AATGCGTGGA
TTCCAGCCAA AACATTTCTC TTTCAACGTG GACGGTGGTC GTTGCGACGC CTGCAAAGGA
GAAGGAGAAG TAATTGTAGA AATGCAGTTC CTGGCAGACG TTCACCTGCA ATGTGAAACC
TGCGGTGGCC GCCGTTTCAA AGAAGAAGTA CTGGAAGTGA CCTATAAAGG CAAAAACATC
TATGACGTAC TTGAAATGAG CGTGGAAGAG TCCCTGGATT TCTTCAAAGA TGAAAAAGAC
GTTTGTAACA AGATTCGTCC GCTGAGTGAT GTAGGGCTGG GATATGTGAA ACTCGGTCAG
AGTAGTGATA CACTGAGTGG TGGTGAAGCA CAGCGTGTGA AACTGGCTTC TTTCCTCGGT
AAAGGAAAAG CACAGGGACA TATCCTGTTC ATCTTCGATG AACCGACTAC CGGTCTTCAC
TTCCATGACA TCAAGAAACT GCTGGCTTCC TTTAACGCCC TGATTGATCA GGGACATAGC
GTACTGGTAA TTGAACACAA TATTGACGTG ATCCGCAGTG CTGACTGGGT AATTGACCTG
GGACCTGAGG GGGGCGCCGG TGGCGGACAG TTATTGTATG CTGGATTGCC GGAAGGGCTG
AAGGATGTGA AGGAGAGTTA TACAGGAAAA TACTTGTAA
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| Protein sequence | MLPEWFTFSI FTSIMATKVK KTETITEAQS VSTQDQIFIK GARVHNLKNV SVGIPRSKLV
VVTGVSGSGK SSLTMDTLYA EGQRRYAESL SAYARQFLMR MNKPDVDYIK GICPAIAIEQ
KVITRTPRST VGSMTEIYDY LRLFFARIGK TYSPVSGQLV KKHEVSDVVD YIKKLPAGSK
IQLLVTFRRH EKRDVKEELQ ILMQKGFSRL YVKEKGKGAL LRIEELLDEK KPALPKEAYL
LVDRLVAKEF EEDDLHRIGD SVQTAFYESE GDCLVEVNGE EMKHFSNRFE LDGMQFEEPV
PNLFSFNNPY GACPVCEGFG QVLGIDADLV IPDKRLSVYE NAIAPWRGEK MGEYKEALIK
ASRKFNFPIH KPIVDLTDEQ VQLLWTGNEH FYGLNEFFKM VEQNLYKVQY RVLQSRYRGR
TGCPECGGGR LRKEALYIKV AGVNIAQLVD MPVSNLYEWF QQLQLSEYDQ QVAKRILVEI
DHRLKTLLDV GLGYLTLNRV ANTLSGGESQ RIQLTRSLGS NLTNSMYILD EPSIGLHARD
THRLIGVLKE LRDLGNTVVV VEHDEMMMEE ADYIIDMGPL ASHLGGEVIF AGNYQEILKD
SKSLTGKYLS GQLSIEPPIK LRKWKKAISL EGCRQHNLKN IDVDFPLQVL TVVSGVSGSG
KTTLVKQILY PALMKLKGEF ADRVGQHRAL KGAVDDITQI EMVDQNPIGK SSRSNPVTYI
KAYDEIRDLY AKQQLSKMRG FQPKHFSFNV DGGRCDACKG EGEVIVEMQF LADVHLQCET
CGGRRFKEEV LEVTYKGKNI YDVLEMSVEE SLDFFKDEKD VCNKIRPLSD VGLGYVKLGQ
SSDTLSGGEA QRVKLASFLG KGKAQGHILF IFDEPTTGLH FHDIKKLLAS FNALIDQGHS
VLVIEHNIDV IRSADWVIDL GPEGGAGGGQ LLYAGLPEGL KDVKESYTGK YL
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