Gene Cpin_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1161 
Symbol 
ID8357277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1385281 
End bp1385586 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content41% 
IMG OID644963317 
Producthypothetical protein 
Protein accessionYP_003120860 
Protein GI256420207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.921537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGTT TAAAATCCAT CAAACTGCCA GCTTACATGC GAAACAAATA CTTCGTTTCC 
GCAGCTGCTT TTTTTGTATG GCTGGCATTC ATCGACAGCA AGAATTTCCT CTCCCAGTAC
GAACTACAAA CCGAAGTCAA TAAACTGGAA GGCCAGAAAG CCTTCTTCAT GGACGAAATT
AAGAAGACCA GAAAAGAACA ACAGGAACTA CTGTCCAGCC CCGAAAAGCT GGAGAAATTC
GCACGTGAAA AATACCTGAT GAAAAGAGAT AATGAAGACC TGTTCATTAT TACAGAGAAA
AACTAA
 
Protein sequence
MPGLKSIKLP AYMRNKYFVS AAAFFVWLAF IDSKNFLSQY ELQTEVNKLE GQKAFFMDEI 
KKTRKEQQEL LSSPEKLEKF AREKYLMKRD NEDLFIITEK N