| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1151 |
|---|
| Symbol | |
|---|
| ID | 8357267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1375394 |
|---|
| End bp | 1376149 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963307 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003120850 |
|---|
| Protein GI | 256420197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.90311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.196817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TGAACTATAA AAGCATTTTT TACGGCAAAT GGAGCTCCGC CGGCTGGGAG
CTGCTTTTAC TCGCCTTTTT CAGCATTGCC CTGACAGCCT GTAACAAGGA AGTCATATCG
GGCTCAGGCA TCGTTATTAC AGAAACAAGA CAAGTCCCGG CATTTTCAGA CGTAGTTGCT
GAGGGATCCT TCCGCGTACA TTTAAGACAG GAGGCCGACG GTCCCGTTGA AGTAACGGCC
GATGACAATG TCATGCGGGC TATTGATACC TATGTCAGCG GCAGCACCCT CCATCTGCGC
ATTAAAAGCG GCGTCAAACT GCATACGTCC AGAGATGTCG ATATCTATGT AAACTCCAGC
CAATATTACG GGGTCTCCTT TTCCGGCGCC GGTAGTGTAG AAAGCCTGGA TACGATCAAA
ACCAACCGGT TTTCCTATAA AATGGATGGA AGTGGTAACG CCCGTTTCAG AATAGTAACT
GACAGATTGG ATACAGAAGT AGATGGCAGT GGCAACATAC AGCTGTTTGG CAGTGCCACC
AGCTTTCACA GTGAGATCAG TGGCAGCGGA GATATCAGCG GACTGGACCT GAATTGTCAG
GATGCCAATC TCTCTGTTAA AGGATCAGGT AATCATACAC TAAGCGTATC ACATTCCCTG
GATGTCAGCA TACGGGGTAG CGGAGATGTC AGGTACAAAG GAGCCGCTAC TATCAGAACA
GATATAAAAG GATCAGGAAG AGTTATCAAA TTATAA
|
|---|
| Protein sequence | MKALNYKSIF YGKWSSAGWE LLLLAFFSIA LTACNKEVIS GSGIVITETR QVPAFSDVVA
EGSFRVHLRQ EADGPVEVTA DDNVMRAIDT YVSGSTLHLR IKSGVKLHTS RDVDIYVNSS
QYYGVSFSGA GSVESLDTIK TNRFSYKMDG SGNARFRIVT DRLDTEVDGS GNIQLFGSAT
SFHSEISGSG DISGLDLNCQ DANLSVKGSG NHTLSVSHSL DVSIRGSGDV RYKGAATIRT
DIKGSGRVIK L
|
|---|
| |