Gene Cpin_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1102 
Symbol 
ID8357216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1323037 
End bp1323435 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content48% 
IMG OID644963256 
Producthypothetical protein 
Protein accessionYP_003120801 
Protein GI256420148 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC AGGCAAAACA GATAGTAACG CAATTCCTGA CAGCAGTACA GCAGGGAGAC 
AATCAGACAC TGGCAGCTTT ACTCGATCCA GCCGTAGAAT GGGAACAACC TGGTGAAAAC
CGCTTTTCCG GCTTTAAAAA GGATATTAAT GAGGTATTCC AGATGGTAGG TGGCATGTTT
GCCCATACCA ATAATACCCT CTCACTGACA AAGATCAAGG ATATCGCGGT CAGCGGCAAC
AGCGTGGCCT GCCTTATCCA ATGGACAGCC GAAGGGGCAG CAGGAGACAG ACTCGATGTG
GATAACATTG ACGTTTATAC CGTTACAGCG GGCAAGATTG TCAAGGCAAA GATCTATTCC
AGTGACCTGG AACAGGAGGA CCGTTTCTGG GGGAAATAA
 
Protein sequence
MENQAKQIVT QFLTAVQQGD NQTLAALLDP AVEWEQPGEN RFSGFKKDIN EVFQMVGGMF 
AHTNNTLSLT KIKDIAVSGN SVACLIQWTA EGAAGDRLDV DNIDVYTVTA GKIVKAKIYS
SDLEQEDRFW GK