Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1093 |
Symbol | |
ID | 8357207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1311047 |
End bp | 1312951 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963247 |
Product | ABC transporter related |
Protein accession | YP_003120792 |
Protein GI | 256420139 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTACG TTACGGTTGA AGGACTCACT AAATCTTACG GCGCAGGGCC GCTTTTCAAG GATATTTCTT TTCACATTGA GGAAGGGGAC AAGATTGCCC TGGTCGCTTT GAATGGCGCC GGTAAATCCA CTTTGCTTCG CATTCTGTGC GGGCAGGAAT CACCTGATGC CGGTACTGTC TGGATCCACA AGGGCGTGAG CGTGGTAATG CTGGAGCAGC AATCCGACTT TGATCCACAA AAAACGATCT CTGCGAATAT CTTTTCACAG TCGAATCCGG TGCTGGCCGC TATCAGAGAC TATGAATTGC TGACAGACGA GGAGGAAGGC GAGCCGGACC TGGATAAGCT GACGGCTGCT ATTGAGCGCA TGGACGAGCT GAATGCCTGG CATTTTGACT CCAAAGTGAA GCAAATCCTG GGTAAACTGA ATATTCATCA CCTGGATCAG CGTATGGGCA GCCTGTCCGG TGGACAGCTG AAACGTGTAG CATTGGCTAA AGTGCTGATT GACATCGGCT TCGAACATCG CCATACGCTC CTGATCATGG ACGAACCTAC CAACCACCTG GATATCAACA TGATCGAGTG GCTGGAAAAT TACCTGGACC AGGAAAATGT GACTTTACTG CTCGTAACGC ACGATCGTTA CTTCCTGGAC AGTGTTTGTA ATGAAATCAT GGAACTGGAT CAGCAACAGC TGTTCATTTA TAAAGGGGAT TACGAAAACT ACCTGGAGAA GAAAGCCGCC CGTGAGGAAA GTGATCGCGC CAGCGTAGAA AAGGCCCGCA ATACCTTCCG GAAAGAGCTG GAATGGATGC GTAAGCAACC AAAGGCCCGT ACGACGAAAT CCAAGTCCAG AATCGACGCA TTTGAAGAGG TAAAGGAAAA GGCCAGCGTA CGCCTGGAGA AACAGCAGCT GGAACTCAAC GTGAAAATGA GCCGTCTGGG GGGAAAGATC ATTGAACTGA AGAAAGTTTA TAAAGCCTTC GGAGATCTGA AGATCCTGAA CGGATTTGAC TATACCTTCA AGAAAGGGGA GAGAATAGGC GTTGTGGGTA AAAACGGGGT AGGTAAATCT ACCTTCCTGA ATATGCTGCA GGGCATTGAA GCGCCGGATT CCGGTAAGAT CAATACCGGA GAAACGGTGA TCTTTGGTAA CTACGATCAG CGTGGTCTTA TTATTAAGGA AGACGTACGT GTGATCGAGT TTGTGAAAAA TATCGCTGAA AACTTCCCGC TGGCAGATGG TACCAAGGTA AGTGCCGCCC AGTTCCTGCA ATTATTCCTG TTTACGCCTG AGAAACAGTA TACTTATATC TCCAAACTGA GTGGTGGTGA GAAAAGAAGA CTGCATCTGC TCAGTATCCT CTTCCGTAAC CCGAACTTCC TGATACTCGA TGAGCCGACC AACGACCTTG ATCTGCCAAC GCTCAGCATT CTGGAAGAGT TCCTGTTGTC TTACCAGGGT TGTATTATCA TTGTAACGCA CGACAGATAT TTCATGGATA AGCTGGTAGA CCACCTTTTT GTGTTCGAGG GAGCCGGCGA AGTGCGTGAC TTCCCTGGTA ACTATAGCCA GTACAGAGAT TGGGAGAAGG ACCAGAATGA AAAAGGGAAG GAAGAAAGCC GTAATGAGCC TAAGGTGGTT GCCCAACCGG TGGTGGAAAC ACCACAACCT GCTGCGCCTG CTAAGAAAAT GTCTTTCAAG GAAAAACGTG AACTGGAACT GCTGGAAAAG GAAATTGCAT CCCTGGAAGC CGAAAAGAAG AGTATTGACG AGCAAATGGG AGCAGGCACA CTGGCTTACG AACAGCTGGA GCCACTTTCA CGCCGTGTAG GAGAGATCAT TCAGTTATTG GATGATAAAG GGTTACGCTG GATGGAGTTG AGCGAAATGG GTTGA
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Protein sequence | MHYVTVEGLT KSYGAGPLFK DISFHIEEGD KIALVALNGA GKSTLLRILC GQESPDAGTV WIHKGVSVVM LEQQSDFDPQ KTISANIFSQ SNPVLAAIRD YELLTDEEEG EPDLDKLTAA IERMDELNAW HFDSKVKQIL GKLNIHHLDQ RMGSLSGGQL KRVALAKVLI DIGFEHRHTL LIMDEPTNHL DINMIEWLEN YLDQENVTLL LVTHDRYFLD SVCNEIMELD QQQLFIYKGD YENYLEKKAA REESDRASVE KARNTFRKEL EWMRKQPKAR TTKSKSRIDA FEEVKEKASV RLEKQQLELN VKMSRLGGKI IELKKVYKAF GDLKILNGFD YTFKKGERIG VVGKNGVGKS TFLNMLQGIE APDSGKINTG ETVIFGNYDQ RGLIIKEDVR VIEFVKNIAE NFPLADGTKV SAAQFLQLFL FTPEKQYTYI SKLSGGEKRR LHLLSILFRN PNFLILDEPT NDLDLPTLSI LEEFLLSYQG CIIIVTHDRY FMDKLVDHLF VFEGAGEVRD FPGNYSQYRD WEKDQNEKGK EESRNEPKVV AQPVVETPQP AAPAKKMSFK EKRELELLEK EIASLEAEKK SIDEQMGAGT LAYEQLEPLS RRVGEIIQLL DDKGLRWMEL SEMG
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