| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1081 |
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| Symbol | |
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| ID | 8357195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1296346 |
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| End bp | 1297611 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644963235 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003120780 |
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| Protein GI | 256420127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGA CTACTGATCT TTATAAGCGG GTAATTGAAC TTGTAAAGGA GAAGCGAAAG
AGTTCGCTGG TAAAGAACTT CTTTTCTCTG TCCATATTGC ATGGACTGAA TATCGTTTTA
CCGCTACTGA CATTGCCCTA TGTGTTGCGT ATTGTAGGCG CCGACCATTA TGGCATTATT
GTAATGGCCA ATTCCCTTTT ACTGTATTTT GATAAGTTTT CTGAATACAG TTTTAATATT
TCTGCTACAA GGGACGTGGC GGTACATAGG GATAACCATG CTGAACTTTG CAGCATCTAC
AGCAAAGTAT TATCAACAAA ATTTCTATTG TTAGGTATCT CCTGCCTGGT TTTTTTTTCG
GTGGTGTTCC TGGTACCCAG ATTCTCGGAA TACTGGTTTA TTTATGCCTT CTGTTTTCTG
CAACTAATAG GTAGTGCGTT ATTCCCCGAA TGGTTTTTTC AGGGGATAGA ACAGATGAAG
TATATCACGA TTATCAATGC ATCGATTAAG ATCTTTTTTA CGATTTGTAT TTTCGTATTG
ATCAAATCAA AAGAAGATTA TTATTATCTC CCCATGTTAA ATATGCTGGG CTATCTTATA
GCAGGCATCT ATGGTCAGTT GTTGTTAACG ATTAAGTATA AGTTACGGTT TTCTTTTCCG
GGATTTGCGG TAATACGTAA GACCCTACAT GATAATTTCA ACATCTTTGT TAATCAGTTT
GTTCCTAATC TTTATAATAA TTCTACCACT TTTATTTTAG GCTTGCTGAC GAATAACAGT
GTAGTCGGAA TTTATGGAGT GTCAAAGAAT ATCGTAGAAT ATGGTATTGA AATCATCAGT
ATCCTTTCAC GCGTATTTTT CCCGCATCTT AACAGAAACT TTAAGTCTTT CGATAAGTTT
GTCAAACTTA TTCTTTCTAT AGGTCTTTTG ATCGCGATCG GTTTTTGTAT AATGTCCTAT
CCCATCGTAT GGGTATTGAA ACTGCCGATG ATCGGGGTGC CGGTTATTTG TATACTGGCG
CCAAGTGTAT TCATGTTTGC GATGTATTGT TGCTATGGTA CGAACTATTT TATTGTCAAG
CGGCAGGACC GTCTGGTAAT GAAAAATACC ATACTGGCAT CATTGACAGG CTTCATCTTG
TCTTTTCCGC TGATCCTTAC AATGGGGGCT ATCGGGGCCG CTATTAATCT GACTTTTGCC
AGGTGTATAC TGGGGATGGG GTTATGGAGA AAATATAAAC TGGACTTTAA AACTGCACAT
GAATGA
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| Protein sequence | MSATTDLYKR VIELVKEKRK SSLVKNFFSL SILHGLNIVL PLLTLPYVLR IVGADHYGII
VMANSLLLYF DKFSEYSFNI SATRDVAVHR DNHAELCSIY SKVLSTKFLL LGISCLVFFS
VVFLVPRFSE YWFIYAFCFL QLIGSALFPE WFFQGIEQMK YITIINASIK IFFTICIFVL
IKSKEDYYYL PMLNMLGYLI AGIYGQLLLT IKYKLRFSFP GFAVIRKTLH DNFNIFVNQF
VPNLYNNSTT FILGLLTNNS VVGIYGVSKN IVEYGIEIIS ILSRVFFPHL NRNFKSFDKF
VKLILSIGLL IAIGFCIMSY PIVWVLKLPM IGVPVICILA PSVFMFAMYC CYGTNYFIVK
RQDRLVMKNT ILASLTGFIL SFPLILTMGA IGAAINLTFA RCILGMGLWR KYKLDFKTAH
E
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