Gene Cpin_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1076 
Symbol 
ID8357190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1289122 
End bp1290234 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content46% 
IMG OID644963230 
ProductUDP-galactopyranose mutase 
Protein accessionYP_003120775 
Protein GI256420122 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAT TTGACTTTTT GATAGTCGGT AGTGGCCTAT TCGGGGCTGT ATTTGCCCGG 
GAGTGCAGGA AAGCCGGAAA GAAGGTGCTG GTGATAGACA GACGTCAGCA TAGCGGCGGA
AATGTCTTTT GTGAAAACGT CAATGGTATT AACGTGCATA AGTATGGCGC GCATATCTTT
CATACAAACG ATAAGCCCAT ATGGGATTAT GTGAATTCCT TTGTAATGTT CAATAACTAC
GTCAATTCCC CATTGGCAGT ATACAAGGAT GAATTGTACA ATCTCCCGTT CAACATGAAT
ACCTTCCATC AGCTGTGGAA GGTGAAGACG CCCCAGGAGG CAAAAGATAA AATTGCTGAA
CAGGTGGCGG CACTGCATAT CAGTGATCCG CAGAACCTGG AGGAGCAGGC TTTATCGCTG
GTCGGGGTGG ATATTTATGA AAAACTGATC AAGGGATATA CCGAGAAGCA ATGGGGAAGG
AAAGCCAGTG AGCTGCCAGC CTTTATCATC AAGCGCTTAC CATTACGTTT TACCTATAAC
AATAACTACT TCAACGACAA ATACCAGGGG ATACCGATCG GTGGCTATAA TCTGCTGATA
GATCGCTTAC TGGAAGGTAT CGAGGTAAGA CTGAATACCG ACTTCTTTTC CGCCCGGGAG
GAACTGTCTG CCCTGGCCAA AAGAGTCGTG TTTACCGGTC AGCTGGATGA GTTTTATAAC
TACCGTTTTG GGATGCTGGA GTACAGAAGT CTGCGCTTTG AGCACCAGGA ACTGACGACC
GACAACTACC AGGGAAATGC CGTGGTGAAT TATACGGAAA GGGAAGTGCC CTACACCCGT
ATTATTGAGC ATAAGCATTT CGAATTTGGT CAGCAGCCGA CGACTATTAT TACCAGGGAA
TATCCGCAGG AATGGACGAA AGGACTGGAG CCGTATTATC CTATTAATGA CGATACAAAT
GCGGGTGTCT ACAAGAAATA TAAGGAGCTG GCGGATAAGG AAACGGACGT CATTTTCGGA
GGTCGGCTGG CTGAATACCG CTATTATGAT ATGCACCAGG TGGTCGGTTC AGCCCTGCAT
ATGGTCAGAC AACATTTGAA AACAAGCGAA TAA
 
Protein sequence
MTEFDFLIVG SGLFGAVFAR ECRKAGKKVL VIDRRQHSGG NVFCENVNGI NVHKYGAHIF 
HTNDKPIWDY VNSFVMFNNY VNSPLAVYKD ELYNLPFNMN TFHQLWKVKT PQEAKDKIAE
QVAALHISDP QNLEEQALSL VGVDIYEKLI KGYTEKQWGR KASELPAFII KRLPLRFTYN
NNYFNDKYQG IPIGGYNLLI DRLLEGIEVR LNTDFFSARE ELSALAKRVV FTGQLDEFYN
YRFGMLEYRS LRFEHQELTT DNYQGNAVVN YTEREVPYTR IIEHKHFEFG QQPTTIITRE
YPQEWTKGLE PYYPINDDTN AGVYKKYKEL ADKETDVIFG GRLAEYRYYD MHQVVGSALH
MVRQHLKTSE