Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1050 |
Symbol | |
ID | 8357164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1257812 |
End bp | 1258678 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963204 |
Product | hypothetical protein |
Protein accession | YP_003120749 |
Protein GI | 256420096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0103943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAC CTTACTTTTT CTTCAAGTGT TTCTTAAAGT CCGGCCTCGT AGCAGTAATA TCCCTGTTCC TGACGCCCGC TTTCGCTCAG AATGAGCTGT CATATACCGG AGAATTGGGC CTTTCAGTGG GCGCAGCTCA TTATTTTGGG GATCTCAATA CCAAAGGTGC GCTGAATGCT GCCAAGCCGT CTATAGGCAT TTATTACCGG AAGTACATGA ACGACTATAT TGGTCTGCGT GTACATGGTC GTTTTATGCA GCTGGGCTAT TCCGATATTT ACAACAAGAA TGATTTTCAG CACAGACGTA ATCTGAGTTT CAATACAGAC GTATTTGAGC TGGGGGTACA GGGTGACTTT AACTTTTTCC GGTTTGAGCC GGGTTCTCAA TATTACCGCT TTTCGCCTTA TTTCACCGGC GGGGCATCTC TCTTCTATTA TAATCCTTAT GCTTACCTGA ACGGGGTGAA ATACCGTCTG CAACCCTTGC GTACCGAGGG GCAGGGTAGC GCCATGTATC CGGATCGGAA GCCTTACAGT CTGACGTCCC TGGCATTTTT GCTGGGAGGA GGTTTCAAGT ATAACGTCTC CCGCAAGGTG AACCTTGGTT TGGAGGTCTT ATACCGGTTT ACCAACACCG ACTATCTGGA TGATGTAAGT ACCACTTATG CTGGTCCGGC CGTATTTCCT CCTGATGCTC AGGGACATAA CACTACTGCC TATCTTTTAC AGGACCGTTC CTACGCTACA GGAGACCGTA TCGGGGTAGC CGGACGTCAG CGTGGCAACA GCCGGGACAA GGACCAGTTT GTTACTGCGG AGCTCACAAT CAGCATTTTA TTCACCTCTT ACAGATGTAA ATTCTGA
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Protein sequence | MGKPYFFFKC FLKSGLVAVI SLFLTPAFAQ NELSYTGELG LSVGAAHYFG DLNTKGALNA AKPSIGIYYR KYMNDYIGLR VHGRFMQLGY SDIYNKNDFQ HRRNLSFNTD VFELGVQGDF NFFRFEPGSQ YYRFSPYFTG GASLFYYNPY AYLNGVKYRL QPLRTEGQGS AMYPDRKPYS LTSLAFLLGG GFKYNVSRKV NLGLEVLYRF TNTDYLDDVS TTYAGPAVFP PDAQGHNTTA YLLQDRSYAT GDRIGVAGRQ RGNSRDKDQF VTAELTISIL FTSYRCKF
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