Gene Cpin_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1050 
Symbol 
ID8357164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1257812 
End bp1258678 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content48% 
IMG OID644963204 
Producthypothetical protein 
Protein accessionYP_003120749 
Protein GI256420096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAC CTTACTTTTT CTTCAAGTGT TTCTTAAAGT CCGGCCTCGT AGCAGTAATA 
TCCCTGTTCC TGACGCCCGC TTTCGCTCAG AATGAGCTGT CATATACCGG AGAATTGGGC
CTTTCAGTGG GCGCAGCTCA TTATTTTGGG GATCTCAATA CCAAAGGTGC GCTGAATGCT
GCCAAGCCGT CTATAGGCAT TTATTACCGG AAGTACATGA ACGACTATAT TGGTCTGCGT
GTACATGGTC GTTTTATGCA GCTGGGCTAT TCCGATATTT ACAACAAGAA TGATTTTCAG
CACAGACGTA ATCTGAGTTT CAATACAGAC GTATTTGAGC TGGGGGTACA GGGTGACTTT
AACTTTTTCC GGTTTGAGCC GGGTTCTCAA TATTACCGCT TTTCGCCTTA TTTCACCGGC
GGGGCATCTC TCTTCTATTA TAATCCTTAT GCTTACCTGA ACGGGGTGAA ATACCGTCTG
CAACCCTTGC GTACCGAGGG GCAGGGTAGC GCCATGTATC CGGATCGGAA GCCTTACAGT
CTGACGTCCC TGGCATTTTT GCTGGGAGGA GGTTTCAAGT ATAACGTCTC CCGCAAGGTG
AACCTTGGTT TGGAGGTCTT ATACCGGTTT ACCAACACCG ACTATCTGGA TGATGTAAGT
ACCACTTATG CTGGTCCGGC CGTATTTCCT CCTGATGCTC AGGGACATAA CACTACTGCC
TATCTTTTAC AGGACCGTTC CTACGCTACA GGAGACCGTA TCGGGGTAGC CGGACGTCAG
CGTGGCAACA GCCGGGACAA GGACCAGTTT GTTACTGCGG AGCTCACAAT CAGCATTTTA
TTCACCTCTT ACAGATGTAA ATTCTGA
 
Protein sequence
MGKPYFFFKC FLKSGLVAVI SLFLTPAFAQ NELSYTGELG LSVGAAHYFG DLNTKGALNA 
AKPSIGIYYR KYMNDYIGLR VHGRFMQLGY SDIYNKNDFQ HRRNLSFNTD VFELGVQGDF
NFFRFEPGSQ YYRFSPYFTG GASLFYYNPY AYLNGVKYRL QPLRTEGQGS AMYPDRKPYS
LTSLAFLLGG GFKYNVSRKV NLGLEVLYRF TNTDYLDDVS TTYAGPAVFP PDAQGHNTTA
YLLQDRSYAT GDRIGVAGRQ RGNSRDKDQF VTAELTISIL FTSYRCKF