Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1048 |
Symbol | |
ID | 8357162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1255637 |
End bp | 1256296 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963202 |
Product | CBS domain containing protein |
Protein accession | YP_003120747 |
Protein GI | 256420094 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCAA GAGATCTCAT ATCAACCGTC GTCCCAATTC TGCATCCCCT GGATCCAGGT TCGAGAGCCC TGCGACTGAT GAATGAATAT CATCTGACGC AGCTGCCACT CGTGTTGGAG AACAAATACC TGGCACTGGT AGAAGAAGAT GATATACTGG ATCTGGAAGA TCCGGAAATT GCTTTGGAAA ACATGGAATA CAACGGCCCT AAACCGGTTG TTGCTGAAAA TGCGCACTTC TTCGAAGCCG TACGTCTTTT TCATGAAATG AAACTAGCCG TACTGCCTGT TATCAGCCAT GAAAAGGAAT ATATCGGCGT ACTCACCAAA GATAGTTTAC TGACTGCCCT CGCACAATAT AATGGTGTGA AGGAACATGG CGGCATCCTG GCACTGGATG TTGATCCGCG TGATTACAGT CTGAGTGAAA TAGCACGTAT TGCAGAGTCC AACGACGTGA CACTGCTCAG CGTGAATACC ATCACCTTTC CTTCCGGTCG CCTGGAAGTA TTGCTGAAGA CCAATCGTCA GGAATTACAT GGACTGGTGG CTACTTTTGA AAGATTTAAT TACATTATTA AGTATACCAT TACTGAAGAG CAGGAAGAAG ACCTGCTGAA GAAAAACTAC GATCTGCTGA TGAATTATAT CAGCATGTAA
|
Protein sequence | MLARDLISTV VPILHPLDPG SRALRLMNEY HLTQLPLVLE NKYLALVEED DILDLEDPEI ALENMEYNGP KPVVAENAHF FEAVRLFHEM KLAVLPVISH EKEYIGVLTK DSLLTALAQY NGVKEHGGIL ALDVDPRDYS LSEIARIAES NDVTLLSVNT ITFPSGRLEV LLKTNRQELH GLVATFERFN YIIKYTITEE QEEDLLKKNY DLLMNYISM
|
| |