| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1038 |
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| Symbol | |
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| ID | 8357152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1246118 |
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| End bp | 1247911 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963192 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003120737 |
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| Protein GI | 256420084 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTA CAGTTGATAA CAAACACGCC CTGAAAGGCG TGGAATTCCT CGTTAAAGAA
ACCCCTGCCA ACGAAGTCTT TACCCCGGAA GATTTCTCTG AAGAACAACG TATGATCAGA
GAAATGGCAG AGCAGTTTGT AACCAAAGAA GTTTCTCCCG TACTGGACCG TATTGATAAA
CTGGAAGAAG GACTCATGCC TTCCCTGCTG GATAAAGCGG GTGAACTGGG CCTGCTGGGC
GCAGCATTTC CGGAAGAATA CGGCGGACTC GGAAAAGACT TCGTCACTGC TACCCTGATC
AATGAAGCTC TTGGCGCCGG CCATTCCTTC TCAGTAGCAA TGGCAGCACA TACGGGTATC
GGTTCTCTCC CTATCCTGTA CTTCGGTACA GAAGCCCAAA AACAGAAATA CATTCCTTTC
CTCGGCAGCG GACAAATGAA AGGCGCTTAT GCACTGACCG AACCCAATTC CGGTTCAGAT
GCCCTCAGCG CCAAGACAAC TGCGAAACTG TCTGCAGATG GAAAATTCTA TATACTGAAC
GGCCAGAAAT GCTGGATCAC CAATTCCGGC TTCGCAGATG TATTCACCGT CTTTGCAAAG
ATCGACGGCG AACAGTTCAC CGCATTCATC GTAGATAAAG ATACTCCCGG CTTCACCCTG
GGTGCTGAAG AACATAAAAT GGGTATCAAA GGATCTTCCA CCAGGCAGAT CTATTTCCAG
GATGCCCAGG TACCCGTGGA AAACGTACTC GGAGAAATCG GTAAAGGTCA CCTGATCGCC
TTCAATATCC TGAACATCGG CCGTCTGAAA CTCTGCGCTG CCGCTGTCGG CGCTGCTAAA
AACGTTACCA GCATCACCGT ACAGTATGCC AATACCCGCG AGCAGTTCAA ACAGCCCATC
GCCAATTTCG GCGCTATCAA ACATAAACTG GGTGAAATGG TGATCCGGAA CTGGGTATGC
GAGTCAGCCC TCTATCGTAC CGCACAGCTC ATTGACGATA AAGAAAAAGA ACTCCTCGCT
GCCGGCAAAC CATTCGCAGA AGCCCTGCTG GGTGCTGCCG AAGAATATGC CGTAGAATGC
GCTATCCTGA AAGTAGCCGG TTCTGAAGCA CTGGACTTCT CCGTGGATGA AGGTGTGCAG
ATCCACGGTG GTAACGGTTT CAGCGATGAA TACGTTATTT CCAAAGCATA CCGCGATAGC
CGTATCAACC GCATATTCGA AGGTACCAAC GAGATCAACC GTCTCCTGGC CCTGGATATG
ACCCTGAAAC GTGCTTTAAA AGGTCGGCTC GATCTCATGA ACCCCGCCAT GAATGTCATG
AAAGAACTCA TGAGCATTCC TGATTTCGGT AACGAAGACG AAACACCTTT TGCCGCGGAA
AAGAAGGTGG TCGCCAACTT CAAAAAAGCC ATCTTACTCG TAGCTGGTGG CGCTGTACAG
AAACTCATGC AGAACCTCCA GAATGAGCAG GAAATACTCA TGAACATTGC TGATATGGCG
ATCGAAACCT TCGCGGCTGA AAGCGCCCTC TTACGTCTCC TGAAACGCAT AGAACTGGAA
GGCGAAACAG TCAACGCATT ACAGGCCGAC ATCGTTCGCA CCTACATCAA TGACGCGGCT
GACCGTATCA ACAAATATGG AAAAGATGCG ATCAATTCAT TCGGTAGCGG CGACGAACAA
CGGATGATGC TACTCGGTAT CAAACGCTTT ACTAAAACGG CTCCTTTCAA TACAAGGGAT
GCACGCAGAC GTATAGCCGA TAAATTAATC GCAGAAAATA AATACGCCTG GTAA
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| Protein sequence | MDATVDNKHA LKGVEFLVKE TPANEVFTPE DFSEEQRMIR EMAEQFVTKE VSPVLDRIDK
LEEGLMPSLL DKAGELGLLG AAFPEEYGGL GKDFVTATLI NEALGAGHSF SVAMAAHTGI
GSLPILYFGT EAQKQKYIPF LGSGQMKGAY ALTEPNSGSD ALSAKTTAKL SADGKFYILN
GQKCWITNSG FADVFTVFAK IDGEQFTAFI VDKDTPGFTL GAEEHKMGIK GSSTRQIYFQ
DAQVPVENVL GEIGKGHLIA FNILNIGRLK LCAAAVGAAK NVTSITVQYA NTREQFKQPI
ANFGAIKHKL GEMVIRNWVC ESALYRTAQL IDDKEKELLA AGKPFAEALL GAAEEYAVEC
AILKVAGSEA LDFSVDEGVQ IHGGNGFSDE YVISKAYRDS RINRIFEGTN EINRLLALDM
TLKRALKGRL DLMNPAMNVM KELMSIPDFG NEDETPFAAE KKVVANFKKA ILLVAGGAVQ
KLMQNLQNEQ EILMNIADMA IETFAAESAL LRLLKRIELE GETVNALQAD IVRTYINDAA
DRINKYGKDA INSFGSGDEQ RMMLLGIKRF TKTAPFNTRD ARRRIADKLI AENKYAW
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