| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1034 |
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| Symbol | |
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| ID | 8357148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1239976 |
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| End bp | 1242792 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963188 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003120733 |
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| Protein GI | 256420080 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT TTCTATTCAC CATTCTTTTT TCCTGGATGA GCATTTTATG CTTCGGACAG
ACCGCCGGCC TGGTGACCGG TAACATCGTC GATAAGAACC AGCATTTATC CCTGCCTGGT
GCGACGCTAA AATTAAAACC AGGTAATCAT TACACTGTTT CCAACCAGCA GGGTAAATTC
GAATTCCTGG GTGTACCTGC AGGTACCTAT ACCCTGGAAG TAACTTATAT TGGTTATCAG
ACATTCACAC AGGAAGTGAC TGTTGCTTCC GGGAAAGCAA CAGACCTGCA ACTGAAACTT
GAAGCTGGCG GTATTGCAGG TAAAGAAGTG CTGGTAATCG GAGACCGTCT CCGTGGTCAG
GCGAAAGCCC TCAATCAGCA GCGTAACAAT CCTAATATTA CTAATATCGT ATCCGCTGAC
CAGATCGGTC GTTTTCCGGA TGCAAACGTA GGTGATGCGA TCAAGCGTAT TCCTGGTATC
ACTATGCAGA ATGACCAGGG TGAAGCCCGT AACATCATTA TCCGTGGTTT AGCGCCGGAA
CTGAACTCAG TGACCCTGAA CGGTGACCGT ATCCCTTCTG CTGAAGGTGA TAACCGTCGT
GTGCAGATGG ACCTGATCCC TTCAGATATG GTACAGACCA TCGAAGTGAA TAAGACCCTG
ACACCTGACA TGGACGCTGA CGCGATCGGC GGTTCCGTAA ACCTGGTAAC CCGTGCAGCG
CCAAACGGTC TGCGTGTATC TGCTACTGCT TCCGGTGGAG TAAACCCGAT CCGTGGTAAA
GCATTATATA CCGGCGGACT GGTAGTGGCG AATCGTTTCT TCAACAACAA ACTGGGTGCG
GTAGTAAGTG CTTCTTATAA TAATAATGAC TATGGTTCCG ATGATATGGA AGCTACCTGG
AGTAAAGATG ACTTCGGTAA TGTTTTTGTT TCTGAATCAG AAGTACGTAA ATATAATGTA
CAGCGTATCC GTAGAAGTGC ATCCGCAGCA TTGGATTACA AGATCAATGC AAAGAACACG
ATCTACGCTT CTGCTATGTA CAACTGGCGC GATGACAGAG AAAACCGTTA CCGCCTGCGT
TTAACTGATA TCGAACCTGA GTATGATGCG AATGACGCTA TCACCGGTTA TGTTGGTTCC
ATACGTCGTG AAACCAAAGG TGGTATCGAT AATGGCCGTA ACAAAAGCCG TCGTCTGGAA
GACCAGCGCG TACAGAACTA CTCCGTACGT GGTGAACACC TGCTGGGTAG CAAAGTAGAC
CTGGACTGGT CTGCCAGCTA TTCAAGAGCA AGTGAAGACA GACCAAATGA GCGTTATATC
GAGTACCGTG CGGATGATGG TCCGGTGAGC CTGGACGTGA GCAATCCACG TTTCCCGCTG
GCAACTGCGC CTAGTGTGAG AGATGAAGAC TTCGGCTTCA AGTCCCTGTC AGAAAACCAC
GATTTTACCA AAGAAAACGA ATATGGCTTC AAACTGAACC TGCGTTTCCC ACTGAGCGTG
GTACCTGGTC AGAAAGGCCG TCTGCGTGTT GGTACACGTC TGCGTCTGAA GGATAAAGAA
AGGGTGAATA ACTTCTTTGA ATATGAGCCA ACCACCGAAT TCGGTAACCT GGCACAAATC
TCCAATATCA ACATCAGCGG TAAAGGTTAT CAGCCAGGTG AAAAATATGT ACCGGGTACG
TTTGTAGTAA ATACTTTCCT GGGTGCACAG CAACTGGATG ACGCTTCTAA ATTTGAGAAG
AACGATAACC CTGCTGAATA CCTCGCGGTA AACTTCAACG CAAAAGAAAG GATCTCTGCC
GGTTATATCC GCTGGGATCA GGACCTGACC AGCAAACTGT CTGTGATTGC AGGTGTACGT
GTTGAGAACA CACACATCAA TTATGAAGGT AACGTAGTAG CTGAAGAAGA AGATCTGGAA
GGACAACGTA AAGTAACCAA CAGTTACACA AACGTGCTGC CTGGCGTTAC ATTCAAATAC
AATGTAAATA GTGATCTGGT ACTGCGTGCA GCAGCAACAA CTTCTATCGC GCGTCCTAAC
TACTATGACA TCGCTCCTTA TGTAAGCAGT GTTGCTGATG ATGCAGAACT GAGTGCAGGT
AACCCATCTC TGAAAGCAGC TTATGCATGG AACTTCGACC TGATGGCTGA GCAGTATTTC
AAATCAGTAG GTATCCTGTC CGGAGGACTG TTTTATAAGA GCATCAGCGA CTTTATCTAC
ACTTACAGAG ATAATGCTTA CACTACTGAG AAATTTGCAG CTGATTATAA AGACGTAGCT
ACCAACCCGA TCCCTGCCGG TGAAGAGTGG GTATACAAAC AGGCGCGTAA CGGCGATAAT
GTAAGAGTAT ATGGTTTTGA AGTTGCATTA CAACGTCAGC TGGATTTCCT GCCAGGTTTC
CTGAAAGGCT TCGGTGTGTA TGTAAATTAT ACTTATACCA AATCTAAAGC AGACGGTATT
TACAATGCGG ATGGCGACAA ACGTGACAAT GTATCTTTAC CAGGTACTGC TCCTCATATG
TTCAATGCTT CCCTGTCTTA TGAGAACCCT CGTTTCACGG CAAGACTGTC CGGTAACTAT
ACCGCTTCTT ACCTGGATGA ACTGGGTGGT GATGATTTTG ACGATCGTTT TTATGATAAA
CAATTCTTCC TGGATCTGAA TGCTTCTTTC AAGCTGACGA AGACTTTAAG AGTATTCGGT
GAAGCAAACA ACCTGACTAA CCAGCCACTG CGCTACTATC AGGGTATTTC TTCCAGGACT
ATGCAGGCAG AATACTATCG TCCGAGATAC AACTTCGGCG TGAAGTTCGA CTTGTAG
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| Protein sequence | MQKFLFTILF SWMSILCFGQ TAGLVTGNIV DKNQHLSLPG ATLKLKPGNH YTVSNQQGKF
EFLGVPAGTY TLEVTYIGYQ TFTQEVTVAS GKATDLQLKL EAGGIAGKEV LVIGDRLRGQ
AKALNQQRNN PNITNIVSAD QIGRFPDANV GDAIKRIPGI TMQNDQGEAR NIIIRGLAPE
LNSVTLNGDR IPSAEGDNRR VQMDLIPSDM VQTIEVNKTL TPDMDADAIG GSVNLVTRAA
PNGLRVSATA SGGVNPIRGK ALYTGGLVVA NRFFNNKLGA VVSASYNNND YGSDDMEATW
SKDDFGNVFV SESEVRKYNV QRIRRSASAA LDYKINAKNT IYASAMYNWR DDRENRYRLR
LTDIEPEYDA NDAITGYVGS IRRETKGGID NGRNKSRRLE DQRVQNYSVR GEHLLGSKVD
LDWSASYSRA SEDRPNERYI EYRADDGPVS LDVSNPRFPL ATAPSVRDED FGFKSLSENH
DFTKENEYGF KLNLRFPLSV VPGQKGRLRV GTRLRLKDKE RVNNFFEYEP TTEFGNLAQI
SNINISGKGY QPGEKYVPGT FVVNTFLGAQ QLDDASKFEK NDNPAEYLAV NFNAKERISA
GYIRWDQDLT SKLSVIAGVR VENTHINYEG NVVAEEEDLE GQRKVTNSYT NVLPGVTFKY
NVNSDLVLRA AATTSIARPN YYDIAPYVSS VADDAELSAG NPSLKAAYAW NFDLMAEQYF
KSVGILSGGL FYKSISDFIY TYRDNAYTTE KFAADYKDVA TNPIPAGEEW VYKQARNGDN
VRVYGFEVAL QRQLDFLPGF LKGFGVYVNY TYTKSKADGI YNADGDKRDN VSLPGTAPHM
FNASLSYENP RFTARLSGNY TASYLDELGG DDFDDRFYDK QFFLDLNASF KLTKTLRVFG
EANNLTNQPL RYYQGISSRT MQAEYYRPRY NFGVKFDL
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