| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1026 |
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| Symbol | |
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| ID | 8357140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1229598 |
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| End bp | 1231271 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963180 |
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| Product | 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family |
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| Protein accession | YP_003120725 |
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| Protein GI | 256420072 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.227195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG CAGCATATTT TAAGAAGAAC CAGTATAAGC ATCTTTTCCT CCTGATATGG
CTGTTACTAG CCCTGTTCCA GGCCGGATTT ACAGAGCTGA TGGATGACGA GGCCTATTAT
TGGGTATATT CCCGTCACCT GGACTGGGGC TACTTCGATC ATCCGCCGAT GGTGGCGTTG
CTGATCAAAT TGGGATATGG CCTGTTCCAT AATGAATTTG GCGTGCGCTT AGGGATGGTT
ATACTCAACC TGCTTACGCT GATCATAACG GATAAACTGA TCCCCCGCAG GGATAATAAA
CTGTTTTACC TGTTGCTGTG TCTCATGGGC GCTATGCAGC TGGGTGGTAT ACTGGCCGTT
CCTGATATTC CGCTGATCTT TTTTACTGCT CTCTTCTTCC TGATATACCG TAATTTCCTG
GAGCAGCAAA GCTGGAAGAA TACATTGTTG CTGGGCCTGA GTATGGCCTT GATGTTCTAT
AGTAAATACC ATGGTATTCT GATTGTCGGC TTTACGCTGA TCTCCAATCT GAACCTGCTG
CGTGTATTTA AATTCTATGT GGCCTGTATC ATTACGACCA TTCTTTTCAT GCCGCATCTT
TACTGGCAGT ATGCGCATAA TTTCCCGTCA TTACAGTATC ACCTGGTAGA ACGAAATGCC
AGCAGTTATA GTGTCAATTA CACCATTGAA TACATACTCG GACAGCTGTT GTTGTTTGGG
CCTGTAGCCG GGTGGCTGGT GTTGTATTAT GCGTTTGTGT GTCCGATTCA GAGTGCTTTT
GAAAGAGCGC TTAAATTCAG CGTGATCGGC GTACTGGCGT TTTTCCTTCT TAGCACGTTC
AAAGGAAGGG TAGAGACCAA CTGGACGGTG ATGTTGTTTA CACCAACGAT GATACTGGCC
CATCAGGCTG TACGTAGGAG ACGTTCCCTG AAATGGTCGC TGCGCATCAT GCCTTATCTC
GCTATCCTGA CGCTTTTCCT GGTAATGGTT ACCAGGGTGT ATATGGTGTG GGATTTTATG
CCGGAGGTAA CAATCCGTCC TGAGATTCAT CATAACAAGC CCTGGGCGGA AGAGATGAAA
AAACATGCTG CCGGCAGACC CGTTGTATTC ATCAACAGTT ATCAATGGCC TTCCAAGTAT
ATGTTCTATA GTGGCGAACT GGCGTATGTC ATCAATAACC GCTATAACCG CCGTAATCAG
TATAACTATT GGGATACAGA GAAACAGCTG TGGGGTAAGC CGGCTATGAT CACATTTACG
CCTGATAACA AACTGCCGTT TTCAGAGCGC TTCAATACCG TAAAAGGACC ATGGAACGCT
TACAGCGCAG ATCCGTATTA TTCTTATTCC CTGATAACAC TGGAACCTGC TATGAAAAAA
GTGAAGGTGA AAAGGGGAGA ACGGATGCCT TTTATTCTGC ATCTGAAGAA TGGTTATGGT
CAGCAGGTAC CTGTTGATAA AGCTAATGAA GCCGTTGTGG GGTATGCTTT CCTGGAGGCA
CAGAATGGCG TGAAATCAGA CCTCGCTGTC AGCAGGGCTA TTGAAAGACG GTTAATACGT
ATGGAGGTGA TCATGCCAGA TGCACCGGGT ATTTATCATC TGAAATTCTG TGTGTTTTCG
GGGATATTGC CGCCGACGCA TAATAGTCAG ACGGTGATCG TTGAAGTCAA TTAA
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| Protein sequence | MAIAAYFKKN QYKHLFLLIW LLLALFQAGF TELMDDEAYY WVYSRHLDWG YFDHPPMVAL
LIKLGYGLFH NEFGVRLGMV ILNLLTLIIT DKLIPRRDNK LFYLLLCLMG AMQLGGILAV
PDIPLIFFTA LFFLIYRNFL EQQSWKNTLL LGLSMALMFY SKYHGILIVG FTLISNLNLL
RVFKFYVACI ITTILFMPHL YWQYAHNFPS LQYHLVERNA SSYSVNYTIE YILGQLLLFG
PVAGWLVLYY AFVCPIQSAF ERALKFSVIG VLAFFLLSTF KGRVETNWTV MLFTPTMILA
HQAVRRRRSL KWSLRIMPYL AILTLFLVMV TRVYMVWDFM PEVTIRPEIH HNKPWAEEMK
KHAAGRPVVF INSYQWPSKY MFYSGELAYV INNRYNRRNQ YNYWDTEKQL WGKPAMITFT
PDNKLPFSER FNTVKGPWNA YSADPYYSYS LITLEPAMKK VKVKRGERMP FILHLKNGYG
QQVPVDKANE AVVGYAFLEA QNGVKSDLAV SRAIERRLIR MEVIMPDAPG IYHLKFCVFS
GILPPTHNSQ TVIVEVN
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