Gene Cpin_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1022 
Symbol 
ID8357136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1226571 
End bp1227032 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content47% 
IMG OID644963176 
Productregulatory protein RecX 
Protein accessionYP_003120721 
Protein GI256420068 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCTT CCGCGATACT GAAACTGCGT CACTATTGTG CCTACCAGGA ACGTTGCCAT 
AGTGAGGTGA AAAGCAAATG TTTTGAGCTG GGATTAAGAG GCGAGGAGGT AGACGAGGCG
ATTGCCGCCC TGATCTCCGA CAACTTCCTG AACGAGGAAC GTTTTGCCAA AGCGTTTGCA
GGCGGAAAAT TCCGTCTGAA ACAATGGGGA CGTAAGAAGA TACAGATGGA GCTGAAACAG
CGGCAGGTAT CGGCTTATTG TATTAAAAAG GGGATGGAAG AGATCGACGC AGAGGACTAT
GACAAAACCC TGTATACCCT GGCGGAGAAG AAATATGCCT CCCTGAAGGG AGAGCAGTAC
CTCAAAAGGA AGTACAAAAC CATGCAATAT CTCCTGCAAA AAGGGTACGA ACCAGAATTT
ATACAGGACG TCATTGAACA AATCGCAAAA GGAGGGGATT AG
 
Protein sequence
MIASAILKLR HYCAYQERCH SEVKSKCFEL GLRGEEVDEA IAALISDNFL NEERFAKAFA 
GGKFRLKQWG RKKIQMELKQ RQVSAYCIKK GMEEIDAEDY DKTLYTLAEK KYASLKGEQY
LKRKYKTMQY LLQKGYEPEF IQDVIEQIAK GGD