| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1007 |
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| Symbol | |
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| ID | 8357121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1210267 |
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| End bp | 1212321 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963161 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003120706 |
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| Protein GI | 256420053 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTTGTT GCTCCATTGT TACCAAGGCT GGCATACCCG CACTAGATAC ACTGGTGGCA
GATTTTGATC ATCTGCCTGC TGCTGTTGAC CTGCGGCCGT ATCTCCTGTC CCTGGTAGAT
AAAGGAGGAT CTTTAACACC ACAACAGATT TCATCAGCAT CATTTAACCA CAACTATCAC
CTGTTCCATG TAGAAAAAAA ACATATTGGA AAAGGAAATA ATTGTTGGCT GAAACTCCAT
GTAAGAAACA CAGGTACCCA GGATTCCACA CTCACTCTCT TTGCCGGCTG GCATGATGAT
ATGAGCTGGT ACATCCAGGA CAGCGCCAAC CACAAAATGC ACCTGCTCAT GCATACCGGT
CTGATGCGGG ACCGCGCAGG TGTACAAAGA TGGGAACACT ACGGTTTTAA CGTCACCGTC
CCTCCCGGCA GCACGCATAC CTACTTCCTG CATATCAACA ACAAATACTA TAACGAAAAC
GGGCTGATGC CCACCTTATT CAATGACCTG CAATACGGAC AATTTCGCAA CGGTCAGTTT
GAATACTACC GCAAAGAAAC CATCCTGATA CATGTATTAC TCGGTATGCT ACTGGTATGC
CTGGCAATCG CCGTCATCAA TTACATACAA CTACCCGATA AATCCTACAT GTACTTTGCA
GCCTACATGC TTGGACTAAT CGTGTTTTTT ACCCTCCGCC TGGAAAGTCA GCCCTACCAG
CTATCCGTAT TCTACCGATG GCCCATGCTG AAATATTACT GGGATATCCC GGCACTGTTA
TTCTGCTTCT ACCTGATGTA TCTCGCCTTT GGCAATACTT TCCTGAACCT CCAGGAGAGA
TACCCTTTCA TGGAGAAACT ATTTACTTCA GTAGCCGCTA TCATCGGAGG TATCATCATT
ATCTGCTTTT ACTGCATTGC ACTGGAACAA TACCAGGTGC CGGTGATGAT TTATAGTTAT
GTCTATATCT CTACCCTGCT CCCTTTCCTG ATCGTATTCA TCGCACTGGC CAGACGCTCG
CGTCATCACC CGCTGGTACG CTTTTTCCTC TTCGGATCAC TCTGTTTCTA CATGGCCAGC
TTCGGTTCAT TCCTCATGCT GATCAGACCA TTGGGACTTA TCAATGCACT CGGAGAGATT
TCCGCACCAT CCCTCCTTAT TGTAGCAGGC GTATTGCTGC AATCTATGTT CTTCCTCGCC
GGACTCAGTT ACCGCAATAA ACTGGTACAC CATGAAAGAA CACGTACACA GGAATTACTG
ATAAAACAGC TGAATAAGAA TAAAGAACTG CAACGTAAAC TGAATGAACA GCTGGAAGAA
CTCGTAAAAG AACAGACCAC AGAGATCCTG CGTAAAAAAC AGGAACTGGA AGAACAACGG
AAAATACACC TGGAAACAGA GTACGATAAG AAACTGACAG AAATAGAACT CAAAGCAATC
CGTGCACAGA TCAATCCGCA CTTCATCTTC AATTGCCTGA ATTCTATTCA GCTGTTCGTT
ATGCAGCGGG ACTTTGAATA TGCACAGAAA TATCTATCTG ACTTCTCCTA CCTGATCCGT
AAAACACTGG ATTTCTCACG TCGCAATTTT ATTTCATTGT CCGATGAAAT TGCATACCTG
AATACTTATC TTGGGTTAGA GAAAATGCGG TTTGAGCATA AGATGGAATA TGAGATTTAT
GTCGATCCTG CTATTGCCAC ATCAGAATCA GAGGTACCCG CCATGCTATT ACAACCTTAT
GTAGAAAACG CAGTGAAATA CGGCATGACC AATACCAGCT ACCCTATCGG CAAATTGCTG
ATACAGTTTA ATCAAATCGC CCCGGATATG CTGGAATGCC TGGTAGAAGA CAATGGCATC
GGTATTATCC GCTCCAAAAC TTTGCGTACC CTACCGAAAC ATCATCAGTC TTCCGGTATG
GAAATCAGCT TCAACCGTGC CGAACTCCTG AATAAGATGT ACAATACAGG TATACATATC
GATATCATTG ACAAATCGGA AAATAATAAC ACAGAAAGTG GTACTATTGT AAGGATACTG
ATCCCCCAAC TTTAG
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| Protein sequence | MFCCSIVTKA GIPALDTLVA DFDHLPAAVD LRPYLLSLVD KGGSLTPQQI SSASFNHNYH
LFHVEKKHIG KGNNCWLKLH VRNTGTQDST LTLFAGWHDD MSWYIQDSAN HKMHLLMHTG
LMRDRAGVQR WEHYGFNVTV PPGSTHTYFL HINNKYYNEN GLMPTLFNDL QYGQFRNGQF
EYYRKETILI HVLLGMLLVC LAIAVINYIQ LPDKSYMYFA AYMLGLIVFF TLRLESQPYQ
LSVFYRWPML KYYWDIPALL FCFYLMYLAF GNTFLNLQER YPFMEKLFTS VAAIIGGIII
ICFYCIALEQ YQVPVMIYSY VYISTLLPFL IVFIALARRS RHHPLVRFFL FGSLCFYMAS
FGSFLMLIRP LGLINALGEI SAPSLLIVAG VLLQSMFFLA GLSYRNKLVH HERTRTQELL
IKQLNKNKEL QRKLNEQLEE LVKEQTTEIL RKKQELEEQR KIHLETEYDK KLTEIELKAI
RAQINPHFIF NCLNSIQLFV MQRDFEYAQK YLSDFSYLIR KTLDFSRRNF ISLSDEIAYL
NTYLGLEKMR FEHKMEYEIY VDPAIATSES EVPAMLLQPY VENAVKYGMT NTSYPIGKLL
IQFNQIAPDM LECLVEDNGI GIIRSKTLRT LPKHHQSSGM EISFNRAELL NKMYNTGIHI
DIIDKSENNN TESGTIVRIL IPQL
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