| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1006 |
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| Symbol | |
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| ID | 8357120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1209487 |
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| End bp | 1210242 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963160 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003120705 |
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| Protein GI | 256420052 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.641502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGG CCGTTATAAT AGATGATGAA CGCAACAGCC GTGATATCAT ATCACTGATG
CTGGAAAAAT ACTGCCCGGA AGTACAGGTA GCCGCTACAG CGTCTGACTG TGCAGACGGC
ATCGCTACGA TTCAGCAACA TCAGCCACAG CTAGTATTCC TTGATCTTGA AATGCCCGAT
GGTACCGGAT TTGACGTATT ATTAGGCACA CAGGACGCCC CTCCTTTTGA AGCCGTTTTT
GTAACCGCTT TTGAAAAGAA ATTCCTGCAT ACCATCCGAT TCAGCGAAGT AGAAATTATC
CTCAAACCGA TTGACCGGGA AAGCCTGATG AATGCAGTCA GTAAGATCGC CGACCGCATA
CATGCTAATG CCAGCACTTC CCGTTATAAA GTATTGCTTG AAAACTTTAA TAATGGCCGT
AATATCAATA TGGATATGGT CATCCCGGTG ACGCAACATG AAGACATGAT CATCGGACTC
AATAAAATCA CCTACCTGGA AGCATCCGCA GAAAAGACAA CCATACATCT GTCGGACCAA
CAGCAAATAC AGGCAGATCG TTCATTCCGC TATTATACAG ACCTGTTCAG CACTTTACGC
TTTTATCAGA TCAACAATCA TCAGATGGTG CAGTTATCTC AGATCAATAA TATTGAAGGG
GATGGCAGCA GGGCCTTGCT GAAGAATGGG GTAAAACTGG AAGTCGCAGA CAGAAGGAGA
AAAGATCTGG TCAGTCACTG GAAACAATAC AGATAA
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| Protein sequence | MIKAVIIDDE RNSRDIISLM LEKYCPEVQV AATASDCADG IATIQQHQPQ LVFLDLEMPD
GTGFDVLLGT QDAPPFEAVF VTAFEKKFLH TIRFSEVEII LKPIDRESLM NAVSKIADRI
HANASTSRYK VLLENFNNGR NINMDMVIPV TQHEDMIIGL NKITYLEASA EKTTIHLSDQ
QQIQADRSFR YYTDLFSTLR FYQINNHQMV QLSQINNIEG DGSRALLKNG VKLEVADRRR
KDLVSHWKQY R
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