Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0997 |
Symbol | |
ID | 8357111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1197580 |
End bp | 1198374 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644963151 |
Product | Ku protein |
Protein accession | YP_003120696 |
Protein GI | 256420043 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCTG TATGGTCAGG AACAATCGGT TTCGGGTTGG TCAATATACC CATCAAATTG TACAGTGCAG TGCAGGACAG CAGACTGGAC CTGGACATGC TGGACAGGAA AGATCACGCC CATATAAAAT TTAAAAGGGT GAATGAAGAT ACAGGCAAAG AAGTGCCGTG GGAACAGATT GTGAAAGGAT ACCTGTATAA TGATGAATAC GTCATCCTGG AAGATGAAGA TTTTCAGGAA GCCAGTCCTG AAAAGAGTAA GATCATCACC ATCGAATCAT TTGTAGAACT GGTGGAAATA GATGATATCT ATTTTGAAAC ACCCTATTTC ATTGAACCGG ATAAAGCCGG CGTTAAAGCA TATGATTTGT TGTTGAAAAC ATTGCAGAAA ACGGGTAAGG CCGGTCTGGG GCGTTTTGTA CTCAGAACGA GTGAACACCT GGCCATTATC CGGCCAAGAG AAGATTATCT GATGTTGCAA CAGCTAAGGT TTTCACAGGA AATACGCTCT CCGGAAGAGC TGTCTTTTCC TTCCAATACA AAAGTCAGCA AGAAGGAGCT GGATATGGCG ATACAGTTGG TGGACAGTTA CACGACTGAA TTTGATATCA GCCAGTTCAA GGATACTTAT CATGAAGAAT TATTAAAGAT CATTAAAGCA AAAGCCAGTG GCAAGCGCCG CACCGTTAAG AAACTGAAAG TGGTGCATAC CAAGAGCAGC GATCTGTTCA GTCAGTTAAA GGCAAGTCTG AATACCTCCT CGTCAGGAAA AACAACTAAA AAACGTGCGT CATGA
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Protein sequence | MRAVWSGTIG FGLVNIPIKL YSAVQDSRLD LDMLDRKDHA HIKFKRVNED TGKEVPWEQI VKGYLYNDEY VILEDEDFQE ASPEKSKIIT IESFVELVEI DDIYFETPYF IEPDKAGVKA YDLLLKTLQK TGKAGLGRFV LRTSEHLAII RPREDYLMLQ QLRFSQEIRS PEELSFPSNT KVSKKELDMA IQLVDSYTTE FDISQFKDTY HEELLKIIKA KASGKRRTVK KLKVVHTKSS DLFSQLKASL NTSSSGKTTK KRAS
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