Gene Cpin_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0978 
Symbol 
ID8357092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1177591 
End bp1178460 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content34% 
IMG OID644963132 
Producthypothetical protein 
Protein accessionYP_003120677 
Protein GI256420024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCA ATCAGAAAAT TCGCGTTGCT TTATCCCTTC CTGGCCTGGA AGATGATAAT 
AATTATTTTG CTTTTTTACT GCAATCCAAT TTGTCTGAAG AACATTCCAT GTTTATTAGT
CCTTCCAAGT TATTCGCGGT ATCTGATATG AATATCGATT TTTATTTACT CTGTAAAATT
TTAATAAGGG CTGGTGTAAT GAATCGATAC TATCAATGGA CATTTGATGA AGGACATTTG
ATGGTTTGGG CTGATCAAAT TGGCAGTGAA AATCTAATTA AATGCTTTTG GTTAATCTAC
TCTTTAGAAG AGGCTGCTTT AAGAAAAGGC GGTCATGTTC ATGTTATTTT GGGAACTGAG
ACAATTTTAA GCCCTTTAGA TAATAAATGG AGATTGCATC AGCCGCAGTA TGCCAAAGGA
ATAGCCCGCA GTACATTTTT ATATGATGGT AATAACGAGT TGTGGCGTTG GTTAAATACA
AAAAATTTTA TTGAACAGAT TGGTGAAAAT ATTTATACTC AACTTGATAT TTCACAAAGG
TATTTTTTCG GTTATGTGTC AATAACAGAA ATTAATAAAT CAATACGTGC CAGACACGCT
TTTAAAACAT TATATAAGGG GCAGAGTCAA AATTCATCGT GTTCAATAAA TATTCATGAT
AACGTTATAA TGGACGAATT GCCAGTTATT AATGGCGTTA AAAACATTAT AACGCGGCGA
AAGAATAGTG AGGGTGAGAT TCTATATTGG GCTTTTCAAA CCAAGTATTC CGTCGATAAA
TCATGGACAT CTATGTGCAA ATTTTTTATG CTGAAGAAGA AGAAATTCTA TTTGCGGAAT
GATCTTGTTG AGAAGCCACA TATCCACTAG
 
Protein sequence
MGINQKIRVA LSLPGLEDDN NYFAFLLQSN LSEEHSMFIS PSKLFAVSDM NIDFYLLCKI 
LIRAGVMNRY YQWTFDEGHL MVWADQIGSE NLIKCFWLIY SLEEAALRKG GHVHVILGTE
TILSPLDNKW RLHQPQYAKG IARSTFLYDG NNELWRWLNT KNFIEQIGEN IYTQLDISQR
YFFGYVSITE INKSIRARHA FKTLYKGQSQ NSSCSINIHD NVIMDELPVI NGVKNIITRR
KNSEGEILYW AFQTKYSVDK SWTSMCKFFM LKKKKFYLRN DLVEKPHIH