Gene Cpin_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0890 
Symbol 
ID8357004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1061466 
End bp1062230 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID644963044 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003120589 
Protein GI256419936 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTG TTTCTTATAA TGTAAACGGA CTGCGTTCCG CCATGAACAA GGGTTTTACG 
GAATGGCTGA AAACAGATCC GGCGGATATT ATCTGCCTGC AGGAAATCAA AGCACACAAA
GACAATGTGG ATTACAAACA GTTTGAAGAG CTTGGCTTCG AACATTACTG GTATCCGGCA
CAGAAAAAAG GCTATAGCGG CGTAGCCGTA CTGACGAAGA TCACCCCTGA TCATGTGCAG
TATGGTAACG GATTCATGCA GAGCGATGCA GAAGGACGTG TTATCCGCCT TGATTTCGGC
GATATTACCC TGATCAATAC CTACATGCCT TCCGGCACCA GCGGCGATGA AAGACAGACC
TATAAATATC AGTGGCTGGA AGAGTTTTAC GGTTATGTAG ACCAGCTGAA AGCAACCAGA
CCAAACCTGA TCATTTGCGG CGACTATAAT ATATGTCACA AACCCATAGA TATCCATGAT
CCTGTGGGCA ACAAGAAATC CAGCGGTTTC CTGCCGGAAG AAAGGGCCTG GCTGGACAAG
CTGTTCAGCA ACGGATTTGT AGATACTTTC CGTCACTATC ATCCGGAACC GCACCAATAC
AGCTGGTGGA GCGTCCGCAC GAATGCAAGG GCAAATAACA AAGGCTGGCG CATCGATTAT
ATCAGCGTCA CGGCGCCATT ACAACCGAAG CTGAAAGATG CCCTGATATG GCCGGATGTA
AAGCATTCCG ACCACTGTCC GATATACCTG CAATTAGAAG CCTAA
 
Protein sequence
MRIVSYNVNG LRSAMNKGFT EWLKTDPADI ICLQEIKAHK DNVDYKQFEE LGFEHYWYPA 
QKKGYSGVAV LTKITPDHVQ YGNGFMQSDA EGRVIRLDFG DITLINTYMP SGTSGDERQT
YKYQWLEEFY GYVDQLKATR PNLIICGDYN ICHKPIDIHD PVGNKKSSGF LPEERAWLDK
LFSNGFVDTF RHYHPEPHQY SWWSVRTNAR ANNKGWRIDY ISVTAPLQPK LKDALIWPDV
KHSDHCPIYL QLEA