Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0890 |
Symbol | |
ID | 8357004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1061466 |
End bp | 1062230 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963044 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_003120589 |
Protein GI | 256419936 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATTG TTTCTTATAA TGTAAACGGA CTGCGTTCCG CCATGAACAA GGGTTTTACG GAATGGCTGA AAACAGATCC GGCGGATATT ATCTGCCTGC AGGAAATCAA AGCACACAAA GACAATGTGG ATTACAAACA GTTTGAAGAG CTTGGCTTCG AACATTACTG GTATCCGGCA CAGAAAAAAG GCTATAGCGG CGTAGCCGTA CTGACGAAGA TCACCCCTGA TCATGTGCAG TATGGTAACG GATTCATGCA GAGCGATGCA GAAGGACGTG TTATCCGCCT TGATTTCGGC GATATTACCC TGATCAATAC CTACATGCCT TCCGGCACCA GCGGCGATGA AAGACAGACC TATAAATATC AGTGGCTGGA AGAGTTTTAC GGTTATGTAG ACCAGCTGAA AGCAACCAGA CCAAACCTGA TCATTTGCGG CGACTATAAT ATATGTCACA AACCCATAGA TATCCATGAT CCTGTGGGCA ACAAGAAATC CAGCGGTTTC CTGCCGGAAG AAAGGGCCTG GCTGGACAAG CTGTTCAGCA ACGGATTTGT AGATACTTTC CGTCACTATC ATCCGGAACC GCACCAATAC AGCTGGTGGA GCGTCCGCAC GAATGCAAGG GCAAATAACA AAGGCTGGCG CATCGATTAT ATCAGCGTCA CGGCGCCATT ACAACCGAAG CTGAAAGATG CCCTGATATG GCCGGATGTA AAGCATTCCG ACCACTGTCC GATATACCTG CAATTAGAAG CCTAA
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Protein sequence | MRIVSYNVNG LRSAMNKGFT EWLKTDPADI ICLQEIKAHK DNVDYKQFEE LGFEHYWYPA QKKGYSGVAV LTKITPDHVQ YGNGFMQSDA EGRVIRLDFG DITLINTYMP SGTSGDERQT YKYQWLEEFY GYVDQLKATR PNLIICGDYN ICHKPIDIHD PVGNKKSSGF LPEERAWLDK LFSNGFVDTF RHYHPEPHQY SWWSVRTNAR ANNKGWRIDY ISVTAPLQPK LKDALIWPDV KHSDHCPIYL QLEA
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